Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0559 ATGGCGGCGAAAATCGAAGGTAAAGCCATCGGCATCGATCTCGGCACCACCTACAGCTGCGTCGGCGTTTGGCTCAACGATCGCGTTGAGATTATCCCCAACGATCAAGGTAATCGAACCACTCCCTCTTATGTAGCTTTCACCGACACCGAGCGTTTGATCGGCGATGCTGCCAAGAACCAGGTCGCTATGAACCCTCAGAACACCGTCTTCGACGCTAAGCGCTTGATCGGCCGGCGACTCTCCGATCCCTCTGTTCAGAGCGACATGAAGCTCTGGCCATTCAGAGTCGTTGCCGGACCTGGCGACAAGCCGATGATCATCGTCAACTACAAAGGCGAAGAGAAGCAGTTTGCTCCGGAGGAGGTTTCTTCTATGGTTCTGATTAAGATGAGAGAAATCGCCGAAGCTTTTCTAGGGCAAGATATCAAGAACGCCGTAGTCACAGTCCCTGCTTATTTCAACGATTCACAGAGACAAGCGACGAAAGATGCTGGCGCTATTGCTGGACTCAACGTGATGCGTATCATCAATGAGCCAACGGCGGCCGCGATTGCGTACGGTCTGGACAAAAAGGCCTCTCGTAAAGGCGAACAGAACGTTCTGATCTTCGATCTTGGCGGCGGGACTTTTGATGTGTCACTCTTGACAATAGAAGAGGGGATTTTCGAGGTCAAGGCCACCGCCGGCGATACTCATCTTGGCGGAGAAGATTTTGACAACAGACTCGTAAATCACTTCGTGACAGAATTCAAGCGCAAGAACAAGAAAGACATAAGCGGCAACGCTAGGGCGCTGAGGAGGCTGAGAACGGCCTGCGAGCGAGCCAAGAGAGCGCTCTCGTCGACCACACAGACGACGATAGAAGTCGATTCCCTTTACGAAGGGATCGATTTCTATGCGACGATAACGAGAGCGAGATTCGAGGAATTGTGTATGGATATGTTCATGAAATGTATGGAACCTGTGGAGAAATGTATCCGGGATGCTAAAACGGATAAAAGCCAAGTTCATGAGGTGGTTTTGGTTGGTGGGTCGACGAGAATTCCCAAAGTTCAGCAGCTTTTGATGGATTACTTCAATGGAAAGGAGCTCTGTAAGAGTATCAACCCGGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGCTGCAATTCTAAGTGGAGAAGGAGACGAGAAAGTTCAAGATCTGCTACTGCTCGATGTCACGCCGCTCAGTCTGGGTCTAGAGACTGCTGGCGGCGTCATGACAGTCCTAATTCCAAGGAACACAACAATCCCAACAAAGAAAGAACAAATCTTCTCCACATACTCAGACAACCAGCCAGGAGTGTTAATCCAAGTCTACGAAGGAGAGCGAGCCAGAACCAAAGACAACAATCTCCTCGGGAAATTCGAGCTCACCGGCATTCCTCCAGCGCCGAGAGGTGTCCCGCAAATCAACGTCGCCTTCGACATCGACGCGAACGGCATTCTGAATGTATCAGCAGAGGACAAGACTGCAGGGGTGAAGAACAAGATCACGATCACGAACGACAAGGGGCGAATGAGCAAAGACGAGATCGAGAGGCTGGTGAAGGATGCGGAGAAGTACAGAGCAGAGGATGAGGAAGTGAAGAAGAAGGTGGAGGCGAAGAATGCATTGGAGAATTATGCATATAACATGAGGAATACTGTGAGAGATGAGAAATTTGCAGGGAAGATGAATCCAGATGACAAGCAGAAGATTGAGAAGTCTGTGGAGGAGACGATCGAGTGGTTGGATAGGAACCAGTTGGCGGAGGTTGATGAGCTTCAGGACAAGCTGAAGGAGCTCGAGGGTGTCTGTAATCCCATCGTTGCTAAGATGTATCAGAGCGGTGGTGTTCCGATGGGTGATGATATGCCTGGTGAGGCTTCTGCCGAGTCCAGCGGTGGTGCTGGGCCGAAGATTGAGGAGGTTGATTAA 1947 50.64 MAAKIEGKAIGIDLGTTYSCVGVWLNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRLSDPSVQSDMKLWPFRVVAGPGDKPMIIVNYKGEEKQFAPEEVSSMVLIKMREIAEAFLGQDIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRKNKKDISGNARALRRLRTACERAKRALSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDMFMKCMEPVEKCIRDAKTDKSQVHEVVLVGGSTRIPKVQQLLMDYFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVAFDIDANGILNVSAEDKTAGVKNKITITNDKGRMSKDEIERLVKDAEKYRAEDEEVKKKVEAKNALENYAYNMRNTVRDEKFAGKMNPDDKQKIEKSVEETIEWLDRNQLAEVDELQDKLKELEGVCNPIVAKMYQSGGVPMGDDMPGEASAESSGGAGPKIEEVD 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5284491 5288501 + Hsped.09g05590.1 Hepe09g0559 579243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0559 648 Gene3D - 71 126 - -
Hepe09g0559 648 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Hepe09g0559 648 Gene3D - 539 648 IPR029048 -
Hepe09g0559 648 Coils Coil 521 541 - -
Hepe09g0559 648 Coils Coil 266 286 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 209 219 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 477 493 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 396 415 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 8 21 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 337 353 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 36 48 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 146 166 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 369 389 - -
Hepe09g0559 648 PRINTS 70kDa heat shock protein signature 58 66 - -
Hepe09g0559 648 Coils Coil 588 608 - -
Hepe09g0559 648 FunFam Heat shock protein 70 546 619 - -
Hepe09g0559 648 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Hepe09g0559 648 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Hepe09g0559 648 Gene3D Actin; Chain A, domain 4 235 318 - -
Hepe09g0559 648 FunFam Heat shock 70 kDa protein 197 264 - -
Hepe09g0559 648 FunFam Heat shock 70 kDa protein 71 126 - -
Hepe09g0559 648 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Hepe09g0559 648 FunFam Heat shock protein 70 10 196 - -
Hepe09g0559 648 Gene3D - 192 366 - -
Hepe09g0559 648 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Hepe09g0559 648 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Hepe09g0559 648 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Hepe09g0559 648 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Hepe09g0559 648 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 389 531 IPR029047 -
Hepe09g0559 648 Gene3D - 10 384 - -
Hepe09g0559 648 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
Hepe09g0559 648 FunFam Heat shock 70 kDa 235 318 - -
Hepe09g0559 648 FunFam Heat shock 70 kDa 391 545 - -
Hepe09g0559 648 SUPERFAMILY Actin-like ATPase domain 196 388 IPR043129 -
Hepe09g0559 648 MobiDBLite consensus disorder prediction 620 648 - -
Hepe09g0559 648 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3024 Hepe-Chr2:79397967 Hepe09g0559 Hepe-Chr9:5284491 0.0 dispersed
Hepe05g1544 Hepe-Chr5:65063270 Hepe09g0559 Hepe-Chr9:5284491 2.00e-82 dispersed
Hepe06g1470 Hepe-Chr6:65281023 Hepe09g0559 Hepe-Chr9:5284491 4.56e-218 dispersed
Hepe07g0372 Hepe-Chr7:3790786 Hepe09g0559 Hepe-Chr9:5284491 1.34e-180 dispersed
Hepe09g0559 Hepe-Chr9:5284491 Hepe09g1220 Hepe-Chr9:15314653 6.81e-37 dispersed
Hepe02g2112 Hepe-Chr2:55536841 Hepe09g0559 Hepe-Chr9:5284491 5.46e-167 transposed
Hepe06g1471 Hepe-Chr6:65283888 Hepe09g0559 Hepe-Chr9:5284491 2.03e-49 transposed
Hepe04g0866 Hepe-Chr4:62915412 Hepe09g0559 Hepe-Chr9:5284491 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0559 K03283 - csv:101215564 1196.42