Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0560 ATGGAAGCCAGCGCTGGACTTGTCGCTGGGTCTCACAACCGCAATGAGCTTGTTGTCATTCATGGCCATGAGGAGCCGAAACCATTGAAGAACTTGGATGGTCAAGTTTGTGAGATCTGTGGTGATGAAGTGGGGCTTACTGTGGATGGTGATCTTTTTGTTGCCTGCAATGAATGTGGTTTTCCAGTCTGCAGACCTTGTTATGAGTATGAAAGAAGAGAAGGAAGCCAACTGTGTCCTCAGTGTAAAACTAGATTCAAGAGACTCAAAGGGAGTCCGAGGGTCGAGGGAGATGACGATGAAGAAGACATAGATGACATCGAACATGAATTCAACATTGATGATGAGAGGAACAATCACAGTCATATGACAGAAGCTATGCTTCATGGCAAGATGAGCTATGGTAGAGGCCCAGATGATGATGAAAATGCACAGTATGGAAGAACACAGCCAGCAAATGGTGAGCTTCCTTTATCATCTCAAGGTTATGGAGAGCAGATGTTATCTTCTTCATTGCATAAACGTGTGCATCCATATCCAGTTTCTGAACCAGGGAGTGCAAGATGGGATGAAAAGAAAGAGGAAGGTTGGAAGGACAGAATGGATGATTGGAAATTGCAGCAAGGCAATCTTGGGCCTGAACCTGATGATGCCAATGACCCTGACATGGCTATGAATGAAGCAGCTAGACAGCCACTATCAAGGAAAGTACCAATAGCATCTAGCAAAATTAATCCTTACCGGATGATAATTGTGGTTCGGCTCGTTGTTCTCGCCTTCTTCCTTCGATATCGGATTCTAAATCCAGTGCATGACGCATTGGGTTTGTGGCTAACTTCGGTGATATGTGAAATCTGGTTTGCATTTTCATGGATCCTCGATCAGTTCCCCAAATGGTACCCAATCGATCGCGAAACCTACTTGGATCGTCTATCCCTCAGGTATGAACGAGAGGGTGAACCTAATTTGCTTGCTCCAGTGGACATCTTCGTCAGTACTGTAGATCCGATGAAGGAACCTCCTCTTGTAACAGCTAACACAATCTTATCTATCTTGGCAATGGACTACCCAGTTGATAAGATTTCATGCTATGTTTCAGACGATGGAGCTTCCATGCTTACCTTTGAAGCAATGTCTGAAACTGCAGAATTTGCCAGGAAATGGGTGCCTTTTTGTAAGAAGTTCTCCATCGAACCACGAGCACCTGAAATGTACTTTTGTGAGAAGATTGATTATCTCAAGGATAAAGTACAACCAACATTTGTAAAGGAGCGTCGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTCAGGATAAATGCTCAAGTAGCAAAAGCCGTGAAAGTTCCCACAGAAGGATGGATAATGCAAGATGGAACACCATGGCCAGGCAACAACACAAAAGATCATCCTGGTATGATCCAAGTCTTTCTGGGTCACAGTGGAGGCCTTGATACAGAAGGGAATGAACTCCCCCGCCTGGTTTATGTATCTCGTGAGAAAAGACCAGGTTTCCAACATCACAAGAAAGCCGGTGCCATGAATGCCTTGGTTCGTGTCTCTGCAGTGCTTACAAATGCTCCATTCATGTTGAACTTGGATTGTGATCACTACATAAACAATAGCAAAGCACCAAGAGAGGCCATGTGTTTCCTTATGGACCCTCAAGTTGGAAAGAAAGTCTGTTATGTTCAATTTCCACAAAGATTTGTTGGAATAGATAGGCATGATCGTTATGCCAACAGAAACACAGTCTTCTTTGATATTAACATGCGAGGTTTAGATGGAATTCAGGGACCTGTATATGTTGGCACAGGGTGTGTCTTTAGGAGGCAGGCTTTATATGGTTATGAACCCCCAAAAGGTCCTAAGCGCCCAAAAATGGTAAGCTGCGATTGCTGTCCATGCTTTGGACGTCGCAAGAAGCTTAAGAACTCTAAAAGTGGGGTAGATGGAGATGCTGCAGTGATGGAAGATGACAAGGAGCTGCTAATGTCTCAAATGAATTTCGAAAAGAAATTCGGACAGTCATCAATTTTTGTTACCTCAACTTTGATGGAAGAAGGTGGTGTTCCACCCTCCTCGAGTCCAGCGGCCCTGCTTAAGGAAGCAATTCATGTTATCAGTTGCGGTTATGAAGACAAAACCGAATGGGGTACCGAGTTGGGCTGGATTTACGGATCTATCACAGAAGATATTCTAACAGGTTTCAAGATGCATTGTCGTGGCTGGAGATCTATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCTATCAACTTGTCTGACCGACTGAACCAGGTGCTTCGGTGGGCACTCGGGTCTATTGAAATCTTTTTCAGCAACCACTGCCCTGTTTGGTATGGTTATAAGGGTGGGAAGCTAAAGTGGCTCGAGAGACTTTCATACGTGAACACAACTGTCTACCCCTTCACTTCAATACCACTTCTCGCCTACTGTACCCTCCCTGCGATCTGCCTGCTCACCGATAAGTTTATCATGCCACCGATAAGCACTTTTGCAAGTCTCTTCTTCATTTCCTTGTTTCTTTCCATTTTTGCTACGGGTATTCTTGAGCTTAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTGTACAAGGTCTATTGAAGGTTTTGGCTGGAATTGATACTAGCTTCACAGTTACATCCAAGGCGACAGATGATGAAGACTTCGGAGAATTATATGCCTTCAAATGGACCACTCTGCTAATCCCTCCAACAACTATTTTGATCATTAACCTTGTTGGGGTTGTTGCAGGCATCTCAGATGCCATAAACAATGGCTATCAATCATGGGGACCTCTATTTGGGAAGCTTTTCTTTGCCTTCTGGGTGATTGTCCATCTCTACCCATTCCTTAAGGGTCTGATGGGCCGACAAAACCGCACACCGACTATAGTCGTCATATGGTCTGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTCCGAATTGATCCGTTTGTGATGAAAACAAAGGGACCCGATACTAAGAAATGTGGACTAAATTGCTGA 3099 44.27 MEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRFKRLKGSPRVEGDDDEEDIDDIEHEFNIDDERNNHSHMTEAMLHGKMSYGRGPDDDENAQYGRTQPANGELPLSSQGYGEQMLSSSLHKRVHPYPVSEPGSARWDEKKEEGWKDRMDDWKLQQGNLGPEPDDANDPDMAMNEAARQPLSRKVPIASSKINPYRMIIVVRLVVLAFFLRYRILNPVHDALGLWLTSVICEIWFAFSWILDQFPKWYPIDRETYLDRLSLRYEREGEPNLLAPVDIFVSTVDPMKEPPLVTANTILSILAMDYPVDKISCYVSDDGASMLTFEAMSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAQVAKAVKVPTEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAPREAMCFLMDPQVGKKVCYVQFPQRFVGIDRHDRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKLKNSKSGVDGDAAVMEDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERLSYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASLFFISLFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKKCGLNC 1032
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5290150 5294998 + Hsped.09g05600.1 Hepe09g0560 579244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0560 1032 CDD mRING-HC-C4C4_CesA 35 85 - -
Hepe09g0560 1032 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Hepe09g0560 1032 Pfam Cellulose synthase 327 1026 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Hepe09g0560 1032 MobiDBLite consensus disorder prediction 146 168 - -
Hepe09g0560 1032 MobiDBLite consensus disorder prediction 133 169 - -
Hepe09g0560 1032 FunFam Cellulose synthase 19 110 - -
Hepe09g0560 1032 SUPERFAMILY RING/U-box 21 107 - -
Hepe09g0560 1032 FunFam Cellulose synthase 444 618 - -
Hepe09g0560 1032 Pfam Zinc-binding RING-finger 27 103 IPR027934 -
Hepe09g0560 1032 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Hepe09g0560 1032 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 442 618 IPR029044 -
Hepe09g0560 1032 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 233 1001 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Hepe09g0560 1032 SUPERFAMILY Nucleotide-diphospho-sugar transferases 340 849 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1128 Hepe-Chr2:13952233 Hepe09g0560 Hepe-Chr9:5290150 4.04e-288 dispersed
Hepe04g0384 Hepe-Chr4:52598062 Hepe09g0560 Hepe-Chr9:5290150 0.0 dispersed
Hepe06g0198 Hepe-Chr6:7163101 Hepe09g0560 Hepe-Chr9:5290150 0.0 dispersed
Hepe08g0452 Hepe-Chr8:3937197 Hepe09g0560 Hepe-Chr9:5290150 3.00e-125 dispersed
Hepe08g0453 Hepe-Chr8:3946416 Hepe09g0560 Hepe-Chr9:5290150 7.73e-123 dispersed
Hepe09g0560 Hepe-Chr9:5290150 Hepe09g1168 Hepe-Chr9:14083482 1.13e-301 dispersed
Hepe09g0560 Hepe-Chr9:5290150 Hepe07g1844 Hepe-Chr7:61367337 1.39e-307 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0560 K10999 - csv:101214842 2047.71