Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0560 | ATGGAAGCCAGCGCTGGACTTGTCGCTGGGTCTCACAACCGCAATGAGCTTGTTGTCATTCATGGCCATGAGGAGCCGAAACCATTGAAGAACTTGGATGGTCAAGTTTGTGAGATCTGTGGTGATGAAGTGGGGCTTACTGTGGATGGTGATCTTTTTGTTGCCTGCAATGAATGTGGTTTTCCAGTCTGCAGACCTTGTTATGAGTATGAAAGAAGAGAAGGAAGCCAACTGTGTCCTCAGTGTAAAACTAGATTCAAGAGACTCAAAGGGAGTCCGAGGGTCGAGGGAGATGACGATGAAGAAGACATAGATGACATCGAACATGAATTCAACATTGATGATGAGAGGAACAATCACAGTCATATGACAGAAGCTATGCTTCATGGCAAGATGAGCTATGGTAGAGGCCCAGATGATGATGAAAATGCACAGTATGGAAGAACACAGCCAGCAAATGGTGAGCTTCCTTTATCATCTCAAGGTTATGGAGAGCAGATGTTATCTTCTTCATTGCATAAACGTGTGCATCCATATCCAGTTTCTGAACCAGGGAGTGCAAGATGGGATGAAAAGAAAGAGGAAGGTTGGAAGGACAGAATGGATGATTGGAAATTGCAGCAAGGCAATCTTGGGCCTGAACCTGATGATGCCAATGACCCTGACATGGCTATGAATGAAGCAGCTAGACAGCCACTATCAAGGAAAGTACCAATAGCATCTAGCAAAATTAATCCTTACCGGATGATAATTGTGGTTCGGCTCGTTGTTCTCGCCTTCTTCCTTCGATATCGGATTCTAAATCCAGTGCATGACGCATTGGGTTTGTGGCTAACTTCGGTGATATGTGAAATCTGGTTTGCATTTTCATGGATCCTCGATCAGTTCCCCAAATGGTACCCAATCGATCGCGAAACCTACTTGGATCGTCTATCCCTCAGGTATGAACGAGAGGGTGAACCTAATTTGCTTGCTCCAGTGGACATCTTCGTCAGTACTGTAGATCCGATGAAGGAACCTCCTCTTGTAACAGCTAACACAATCTTATCTATCTTGGCAATGGACTACCCAGTTGATAAGATTTCATGCTATGTTTCAGACGATGGAGCTTCCATGCTTACCTTTGAAGCAATGTCTGAAACTGCAGAATTTGCCAGGAAATGGGTGCCTTTTTGTAAGAAGTTCTCCATCGAACCACGAGCACCTGAAATGTACTTTTGTGAGAAGATTGATTATCTCAAGGATAAAGTACAACCAACATTTGTAAAGGAGCGTCGAGCAATGAAGAGAGAGTATGAAGAATTCAAGGTCAGGATAAATGCTCAAGTAGCAAAAGCCGTGAAAGTTCCCACAGAAGGATGGATAATGCAAGATGGAACACCATGGCCAGGCAACAACACAAAAGATCATCCTGGTATGATCCAAGTCTTTCTGGGTCACAGTGGAGGCCTTGATACAGAAGGGAATGAACTCCCCCGCCTGGTTTATGTATCTCGTGAGAAAAGACCAGGTTTCCAACATCACAAGAAAGCCGGTGCCATGAATGCCTTGGTTCGTGTCTCTGCAGTGCTTACAAATGCTCCATTCATGTTGAACTTGGATTGTGATCACTACATAAACAATAGCAAAGCACCAAGAGAGGCCATGTGTTTCCTTATGGACCCTCAAGTTGGAAAGAAAGTCTGTTATGTTCAATTTCCACAAAGATTTGTTGGAATAGATAGGCATGATCGTTATGCCAACAGAAACACAGTCTTCTTTGATATTAACATGCGAGGTTTAGATGGAATTCAGGGACCTGTATATGTTGGCACAGGGTGTGTCTTTAGGAGGCAGGCTTTATATGGTTATGAACCCCCAAAAGGTCCTAAGCGCCCAAAAATGGTAAGCTGCGATTGCTGTCCATGCTTTGGACGTCGCAAGAAGCTTAAGAACTCTAAAAGTGGGGTAGATGGAGATGCTGCAGTGATGGAAGATGACAAGGAGCTGCTAATGTCTCAAATGAATTTCGAAAAGAAATTCGGACAGTCATCAATTTTTGTTACCTCAACTTTGATGGAAGAAGGTGGTGTTCCACCCTCCTCGAGTCCAGCGGCCCTGCTTAAGGAAGCAATTCATGTTATCAGTTGCGGTTATGAAGACAAAACCGAATGGGGTACCGAGTTGGGCTGGATTTACGGATCTATCACAGAAGATATTCTAACAGGTTTCAAGATGCATTGTCGTGGCTGGAGATCTATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCTATCAACTTGTCTGACCGACTGAACCAGGTGCTTCGGTGGGCACTCGGGTCTATTGAAATCTTTTTCAGCAACCACTGCCCTGTTTGGTATGGTTATAAGGGTGGGAAGCTAAAGTGGCTCGAGAGACTTTCATACGTGAACACAACTGTCTACCCCTTCACTTCAATACCACTTCTCGCCTACTGTACCCTCCCTGCGATCTGCCTGCTCACCGATAAGTTTATCATGCCACCGATAAGCACTTTTGCAAGTCTCTTCTTCATTTCCTTGTTTCTTTCCATTTTTGCTACGGGTATTCTTGAGCTTAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTGTACAAGGTCTATTGAAGGTTTTGGCTGGAATTGATACTAGCTTCACAGTTACATCCAAGGCGACAGATGATGAAGACTTCGGAGAATTATATGCCTTCAAATGGACCACTCTGCTAATCCCTCCAACAACTATTTTGATCATTAACCTTGTTGGGGTTGTTGCAGGCATCTCAGATGCCATAAACAATGGCTATCAATCATGGGGACCTCTATTTGGGAAGCTTTTCTTTGCCTTCTGGGTGATTGTCCATCTCTACCCATTCCTTAAGGGTCTGATGGGCCGACAAAACCGCACACCGACTATAGTCGTCATATGGTCTGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTCCGAATTGATCCGTTTGTGATGAAAACAAAGGGACCCGATACTAAGAAATGTGGACTAAATTGCTGA | 3099 | 44.27 | MEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRFKRLKGSPRVEGDDDEEDIDDIEHEFNIDDERNNHSHMTEAMLHGKMSYGRGPDDDENAQYGRTQPANGELPLSSQGYGEQMLSSSLHKRVHPYPVSEPGSARWDEKKEEGWKDRMDDWKLQQGNLGPEPDDANDPDMAMNEAARQPLSRKVPIASSKINPYRMIIVVRLVVLAFFLRYRILNPVHDALGLWLTSVICEIWFAFSWILDQFPKWYPIDRETYLDRLSLRYEREGEPNLLAPVDIFVSTVDPMKEPPLVTANTILSILAMDYPVDKISCYVSDDGASMLTFEAMSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAQVAKAVKVPTEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAPREAMCFLMDPQVGKKVCYVQFPQRFVGIDRHDRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKLKNSKSGVDGDAAVMEDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERLSYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASLFFISLFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKKCGLNC | 1032 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5290150 | 5294998 | + | Hsped.09g05600.1 | Hepe09g0560 | 579244 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0560 | 1032 | CDD | mRING-HC-C4C4_CesA | 35 | 85 | - | - | |
Hepe09g0560 | 1032 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 20 | 110 | IPR013083 | - | |
Hepe09g0560 | 1032 | Pfam | Cellulose synthase | 327 | 1026 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Hepe09g0560 | 1032 | MobiDBLite | consensus disorder prediction | 146 | 168 | - | - | |
Hepe09g0560 | 1032 | MobiDBLite | consensus disorder prediction | 133 | 169 | - | - | |
Hepe09g0560 | 1032 | FunFam | Cellulose synthase | 19 | 110 | - | - | |
Hepe09g0560 | 1032 | SUPERFAMILY | RING/U-box | 21 | 107 | - | - | |
Hepe09g0560 | 1032 | FunFam | Cellulose synthase | 444 | 618 | - | - | |
Hepe09g0560 | 1032 | Pfam | Zinc-binding RING-finger | 27 | 103 | IPR027934 | - | |
Hepe09g0560 | 1032 | ProSiteProfiles | Zinc finger RING-type profile. | 37 | 83 | IPR001841 | - | |
Hepe09g0560 | 1032 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 442 | 618 | IPR029044 | - | |
Hepe09g0560 | 1032 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 233 | 1001 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Hepe09g0560 | 1032 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 340 | 849 | IPR029044 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1128 | Hepe-Chr2:13952233 | Hepe09g0560 | Hepe-Chr9:5290150 | 4.04e-288 | dispersed | |
Hepe04g0384 | Hepe-Chr4:52598062 | Hepe09g0560 | Hepe-Chr9:5290150 | 0.0 | dispersed | |
Hepe06g0198 | Hepe-Chr6:7163101 | Hepe09g0560 | Hepe-Chr9:5290150 | 0.0 | dispersed | |
Hepe08g0452 | Hepe-Chr8:3937197 | Hepe09g0560 | Hepe-Chr9:5290150 | 3.00e-125 | dispersed | |
Hepe08g0453 | Hepe-Chr8:3946416 | Hepe09g0560 | Hepe-Chr9:5290150 | 7.73e-123 | dispersed | |
Hepe09g0560 | Hepe-Chr9:5290150 | Hepe09g1168 | Hepe-Chr9:14083482 | 1.13e-301 | dispersed | |
Hepe09g0560 | Hepe-Chr9:5290150 | Hepe07g1844 | Hepe-Chr7:61367337 | 1.39e-307 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0560 | K10999 | - | csv:101214842 | 2047.71 |