Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0565 | ATGAGCTACTATCGATACAAACATCGGCAGTCCATTGATCGTATTAAGGGGATACTGAACAAGCAAACACCAGAGAAGTTTGATCTCCTTAAGGATCAGCTAAATGACTCAACATCCCCTTATATTTGGATGGCTGTGGTTTCACTGATTTTTGACAAGGCTGTTCTTGATCCCACATTTTGCCCCATGTATGCTCAATTGTGTTATGATCTCAATCAGAAGCTACCTGAATTTCCCTCTGATGAACCTGACGATGGTGGACGCAAAATTACTTTTAAACGAATGCTTTTAAATTTGTGTCAAATGACTTTTGAAGGTGCAGATAGTTTGAGTGAAGAGGTTAGGCAGATGACTGCCGGCAAGCGCAGAGATAAAGAAAGACTGCTCAAACTTCGCTTCCTTGGAAATATTCGATTCATTGGAGAGCTTCTGAAGCAAAAGATGGTCACTTTCAGAATTGCCTACGAAATCATCGAGGAACTATTTGGAACAGATAACAAAACATGTCCTTGTGAAGAAAATGTCGAGGCCATCTGTGTGTTCCTTAACACCATAGGTAAGCTGCTAGACAACAAGCACCCAAAGGGGCCTACTATAAATGACGTGTACTTTGACCGATTGAAAGAACTGATTGCACACTCTCAGTTGAGCCCACGATTGAAGATCATGGTCCGTGATGTTATTCATATGCGTTCTAACAATTGGGGTGAAGAGGCAAAAGGCAAAACTAGTAATGAAATACATTCGGAGATACTGGTGGGCTCATTTGTAATAAAATTAGGGGTGTAA | 789 | 40.94 | MSYYRYKHRQSIDRIKGILNKQTPEKFDLLKDQLNDSTSPYIWMAVVSLIFDKAVLDPTFCPMYAQLCYDLNQKLPEFPSDEPDDGGRKITFKRMLLNLCQMTFEGADSLSEEVRQMTAGKRRDKERLLKLRFLGNIRFIGELLKQKMVTFRIAYEIIEELFGTDNKTCPCEENVEAICVFLNTIGKLLDNKHPKGPTINDVYFDRLKELIAHSQLSPRLKIMVRDVIHMRSNNWGEEAKGKTSNEIHSEILVGSFVIKLGV | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5309990 | 5312899 | + | Hsped.09g05650.1 | Hepe09g0565 | 579249 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0565 | 262 | SMART | if4_15 | 12 | 234 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Hepe09g0565 | 262 | Pfam | MIF4G domain | 14 | 234 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Hepe09g0565 | 262 | Gene3D | - | 5 | 236 | - | - | |
Hepe09g0565 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 14 | 250 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER) | |
Hepe09g0565 | 262 | SUPERFAMILY | ARM repeat | 5 | 236 | IPR016024 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe09g0563 | Hepe-Chr9:5301871 | Hepe09g0565 | Hepe-Chr9:5309990 | 1.68e-103 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0565 | K03260 | - | csv:101207520 | 317.005 |