Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0565 ATGAGCTACTATCGATACAAACATCGGCAGTCCATTGATCGTATTAAGGGGATACTGAACAAGCAAACACCAGAGAAGTTTGATCTCCTTAAGGATCAGCTAAATGACTCAACATCCCCTTATATTTGGATGGCTGTGGTTTCACTGATTTTTGACAAGGCTGTTCTTGATCCCACATTTTGCCCCATGTATGCTCAATTGTGTTATGATCTCAATCAGAAGCTACCTGAATTTCCCTCTGATGAACCTGACGATGGTGGACGCAAAATTACTTTTAAACGAATGCTTTTAAATTTGTGTCAAATGACTTTTGAAGGTGCAGATAGTTTGAGTGAAGAGGTTAGGCAGATGACTGCCGGCAAGCGCAGAGATAAAGAAAGACTGCTCAAACTTCGCTTCCTTGGAAATATTCGATTCATTGGAGAGCTTCTGAAGCAAAAGATGGTCACTTTCAGAATTGCCTACGAAATCATCGAGGAACTATTTGGAACAGATAACAAAACATGTCCTTGTGAAGAAAATGTCGAGGCCATCTGTGTGTTCCTTAACACCATAGGTAAGCTGCTAGACAACAAGCACCCAAAGGGGCCTACTATAAATGACGTGTACTTTGACCGATTGAAAGAACTGATTGCACACTCTCAGTTGAGCCCACGATTGAAGATCATGGTCCGTGATGTTATTCATATGCGTTCTAACAATTGGGGTGAAGAGGCAAAAGGCAAAACTAGTAATGAAATACATTCGGAGATACTGGTGGGCTCATTTGTAATAAAATTAGGGGTGTAA 789 40.94 MSYYRYKHRQSIDRIKGILNKQTPEKFDLLKDQLNDSTSPYIWMAVVSLIFDKAVLDPTFCPMYAQLCYDLNQKLPEFPSDEPDDGGRKITFKRMLLNLCQMTFEGADSLSEEVRQMTAGKRRDKERLLKLRFLGNIRFIGELLKQKMVTFRIAYEIIEELFGTDNKTCPCEENVEAICVFLNTIGKLLDNKHPKGPTINDVYFDRLKELIAHSQLSPRLKIMVRDVIHMRSNNWGEEAKGKTSNEIHSEILVGSFVIKLGV 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5309990 5312899 + Hsped.09g05650.1 Hepe09g0565 579249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0565 262 SMART if4_15 12 234 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe09g0565 262 Pfam MIF4G domain 14 234 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe09g0565 262 Gene3D - 5 236 - -
Hepe09g0565 262 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 14 250 IPR045208 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER)
Hepe09g0565 262 SUPERFAMILY ARM repeat 5 236 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0563 Hepe-Chr9:5301871 Hepe09g0565 Hepe-Chr9:5309990 1.68e-103 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0565 K03260 - csv:101207520 317.005