Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g0577 | ATGGCGGAGCGGGAAGGCTTCGAAACTAACCAACTTGGAAGCTTGAAGGTTACTGCGGGGGAGGAGGAGGATGAAGATGAAGAGATGGAGGATTCGGAGGAGGATTTGGAGGTTGAGTTGGAAGATGGAGGAGGAGGAGTGAGTGAGTTGCAACTGACTGAGTTGAGGACGGTTAGTGAAGCTTCGGTGAGGGGGTTTCGTTCTGAAACCCTAGCGGCGCCTTCTGCGAATCAGTTCTCGGAGAACGGTCGGTCTGATGGTTTGTTCGTCAATTCTGCTGCGCAGTCACTTGAAGGAGCTGAATTGAAGCAACCTCCATCTTCCCGCAATGTGCCTTTGGCTGTTGAAGCAACCCAGACAGATCAGATGCAAGAACAAAGCCAACTTCAGGTGTCAACATATAAAGGACCTGATTCAGATCAATCACCAACTTCAGTTACCCAGTCTATCTCATCCTCCGCAAGTCCAAGTTTATCCGAACATAAACTGTTATCTAAGAAGGTCCATAAAGAATGTAAGCCAGAACCGAGCCAGAAAACTTCTTCCAACCATAAAACTGCATCATCTATTCCCAATGTTAGGACACCTGCTTCTGATGGTTACAATTGGAGAAAATATGGTCAGAAGCAAGTGAAGAGTCCTAAGGGTTCACGTAGCTATTACAAGTGTACATATTCTGAATGCTGTGCTAAGAAGATTGAATGTTGTGATCACTTAGGCCAAATAACAGAGACTGTTTACAAGAGCCAACATAGCCACGATCCACCTAGGAAGATTAACAACCCCAAGGAAAGTAGGCTTGTGCCATATGTTGAGCCTGTGGTTAAAAAAATCATTGCAGAACATTCAAGAAGAGTAATTATTGGTTCAGATCCTCCCACTCCTTCTAAAGAACCTTTACGGGAAACAGCTATAGTCCTTGAAAGAAAACGACCGTACTCAAATGACTCTGATGGAAATGATGAATTTAAAATCAAAGATGAGAATGATGAAGAATCTGAGACAAAACAAAAAGTTAAGAAAAGCAGTGCGGGATATTCAGGTACTCCCTTAAAACCTGGGAAGAAACCCAAATTTGTGGTGCATGCAGCGGGTGACGTGGGAATCTCGGGTGACGGATACAGATGGCGCAAGTATGGTCAGAAAATGGTGAAAGGAAATCCTCATCCTAGGAACTACTACCGATGTACCTCAGCTGGCTGTCCAGTCCGTAAACATATCGAATCAGCTGTAGAAAATCCAAATGCAGTGATTATAACATACAAGGGAGTTCATGATCATGACATGCCTGTACCGAAGAAACGACACGGTCCACCAAGTGCTCCTCTTGTAGCTGCTGCAGCTCCAGCCTCCATGAACAATGTGCAACCGAAGAAAACAGAAGCGGTTCAGAGCCAAATTTCTTCAACACAGTGGTCAGTGGATGCTGAAGGAGAGCTGACTGGTGAGGCCTTGGACCTTGGAGGCGAGAAGGCAATGGAATCTGCTCGAACACTTTTGAGCATTGGATTTGAAATTAAGCCTTGCTGA | 1530 | 45.16 | MAEREGFETNQLGSLKVTAGEEEDEDEEMEDSEEDLEVELEDGGGGVSELQLTELRTVSEASVRGFRSETLAAPSANQFSENGRSDGLFVNSAAQSLEGAELKQPPSSRNVPLAVEATQTDQMQEQSQLQVSTYKGPDSDQSPTSVTQSISSSASPSLSEHKLLSKKVHKECKPEPSQKTSSNHKTASSIPNVRTPASDGYNWRKYGQKQVKSPKGSRSYYKCTYSECCAKKIECCDHLGQITETVYKSQHSHDPPRKINNPKESRLVPYVEPVVKKIIAEHSRRVIIGSDPPTPSKEPLRETAIVLERKRPYSNDSDGNDEFKIKDENDEESETKQKVKKSSAGYSGTPLKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVENPNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNVQPKKTEAVQSQISSTQWSVDAEGELTGEALDLGGEKAMESARTLLSIGFEIKPC | 509 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 5380043 | 5384865 | - | Hsped.09g05770.1 | Hepe09g0577 | 579261 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g0577 | 509 | FunFam | WRKY transcription factor | 357 | 431 | - | - | |
| Hepe09g0577 | 509 | SMART | WRKY_cls | 370 | 429 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | SMART | WRKY_cls | 197 | 255 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | SUPERFAMILY | WRKY DNA-binding domain | 366 | 430 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | Coils | Coil | 19 | 42 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 20 | 42 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 308 | 339 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 60 | 201 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 71 | 103 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 179 | 196 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 111 | 160 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 308 | 357 | - | - | |
| Hepe09g0577 | 509 | MobiDBLite | consensus disorder prediction | 162 | 178 | - | - | |
| Hepe09g0577 | 509 | ProSiteProfiles | WRKY domain profile. | 365 | 430 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 120 | 453 | IPR044810 | GO:0003700(InterPro) | |
| Hepe09g0577 | 509 | Pfam | WRKY DNA -binding domain | 199 | 254 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | Pfam | WRKY DNA -binding domain | 372 | 428 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | ProSiteProfiles | WRKY domain profile. | 198 | 256 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | SUPERFAMILY | WRKY DNA-binding domain | 195 | 256 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | Gene3D | WRKY domain | 182 | 257 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Hepe09g0577 | 509 | Gene3D | WRKY domain | 355 | 431 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe09g0577 | Hepe-Chr9:5380043 | Hepe10g1775 | Hepe-Chr10:54519892 | 1.58e-44 | dispersed | |
| Hepe09g0577 | Hepe-Chr9:5380043 | Hepe02g3191 | Hepe-Chr2:81462853 | 1.28e-46 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 56362 | PF03106 | WRKY | 6.60E-24 | CL0274 | Hepe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g0577 | - | - | - | 0.0 |