Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0586 ATGGCGGAGAAGGACAGAGACGGTCAATCTGGTGTGCTCCATGGAAAGTATGAGTTAGGTCGGCTTCTAGGGCATGGTACTTTTGCGAAGGTTTACCATGCCCGGAATTTGCAGAGTGGGACGAGCATGGCGATGAAGGTGGTTGGAAAGGAGAAGGTCATCAAAGTAGGAATGATGGAGCAGATCAAGAGGGAGATCTCTGTGATGAAGATGGTGAAGCATCCGAATATTGTCGAGCTTCATGAGGTTATGGCGAGCAAATCGAAGATCTATTTCGCTATGGAGTTTGTTCGAGGCGGAGAACTGTTCTCCAAAATTTCCAGAGGTCGATTGAGAGAAGATGTGGCTAGAGTTTACTTTCAGCAGCTGATTTCTGCGATTGATTTCTGCCACAGCCGTGGAGTTTATCATCGGGATCTCAAACCGGAGAATCTTCTTCTCGACGACGATGGAAATCTTAAGGTAACTGATTTTGGACTCAGCGCATTTTCGGAGCATTTGAAACAGGATGGATTGTTGCATACAACTTGTGGTACGCCGGCGTATGTTGCGCCGGAAGTTATCGGGAAGAAGGGATACAACGGCGCCAAAGCCGATCTGTGGTCATGTGGAGTCATCCTTTACGTTCTCCTCGCCGGATTTCTCCCATTTCAGGACGACAATATTGTGTCCATGTACCGGAAGATTTACAGAGGAGATTTCAAATGTCCGCCGTGGTTCTCCCCGGAAGCCCGTCGATTAGTCACGAAACTCCTCGATCCAAATCCGAGCACCAGAATTACAACATCGAAGATTATGGAATCGTCCTGGTTCAGGAAATCCGTACCGAGGACTGTGACGGCGAAAGAGGAGCATGAATTCGAGAAATTGAAGCAATCGGAGACGCTAAATGCCTTTCATATAATTTCATTATCAGAAGGGTTCGATTTGTCGCCGCTTTTCGAGGAGAAGAAGAGGGAAGAGAAAGAGGAGCTGAGATTCGCAACGACGAGGCCGGCGAGCAGTGTGATATCGAAGCTGGAAGAGGTGGCGAAGGCGGGGAAATTCAACTTCAAAAAGAGCGAATCCAGGGTAAGATTGCAGGGGCAAGAGTGTGGACGAAAAGGGAAACTGGCGGTGGCGGCGGAGATCTTCGCCGTGACGCCGACGTTTCTGGTGGTGGAGGTGAAGAAAGATCATGGTGACACACTTGAATACAACCAGTTCTGTAGCAAAGAGCTCCGGCCGGCGCTCAAGGATATTGTGTGGACATCACCGACGGAGAACCCCATGCCGGCGGCTTGA 1284 49.53 MAEKDRDGQSGVLHGKYELGRLLGHGTFAKVYHARNLQSGTSMAMKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVELHEVMASKSKIYFAMEFVRGGELFSKISRGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDDDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVIGKKGYNGAKADLWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSPEARRLVTKLLDPNPSTRITTSKIMESSWFRKSVPRTVTAKEEHEFEKLKQSETLNAFHIISLSEGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAGKFNFKKSESRVRLQGQECGRKGKLAVAAEIFAVTPTFLVVEVKKDHGDTLEYNQFCSKELRPALKDIVWTSPTENPMPAA 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5510841 5512742 + Hsped.09g05860.1 Hepe09g0586 579270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0586 427 FunFam Non-specific serine/threonine protein kinase 291 416 - -
Hepe09g0586 427 Pfam NAF domain 294 353 IPR004041 GO:0007165(InterPro)
Hepe09g0586 427 Gene3D Transferase(Phosphotransferase) domain 1 97 277 - -
Hepe09g0586 427 SMART serkin_6 17 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0586 427 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 411 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe09g0586 427 FunFam Non-specific serine/threonine protein kinase 9 96 - -
Hepe09g0586 427 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0586 427 CDD CIPK_C 297 412 - -
Hepe09g0586 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0586 427 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524(InterPro)
Hepe09g0586 427 FunFam Non-specific serine/threonine protein kinase 7 296 - -
Hepe09g0586 427 Gene3D Phosphorylase Kinase; domain 1 10 96 - -
Hepe09g0586 427 CDD STKc_SnRK3 16 270 - -
Hepe09g0586 427 Gene3D Kinase associated domain 1, KA1 291 417 - -
Hepe09g0586 427 ProSiteProfiles NAF domain profile. 291 315 IPR018451 GO:0007165(InterPro)
Hepe09g0586 427 SUPERFAMILY Protein kinase-like (PK-like) 13 303 IPR011009 -
Hepe09g0586 427 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1922 Hepe-Chr4:74154937 Hepe09g0586 Hepe-Chr9:5510841 2.63e-173 dispersed
Hepe05g1603 Hepe-Chr5:65735092 Hepe09g0586 Hepe-Chr9:5510841 1.69e-112 dispersed
Hepe09g0586 Hepe-Chr9:5510841 Hepe09g0673 Hepe-Chr9:6368696 4.66e-130 dispersed
Hepe08g2458 Hepe-Chr8:65577880 Hepe09g0586 Hepe-Chr9:5510841 1.19e-259 transposed
Hepe02g1295 Hepe-Chr2:16313192 Hepe09g0586 Hepe-Chr9:5510841 3.12e-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73123 PF00069 Pkinase 5.70E-73 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0586 - - - 0.0