Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0590 | ATGCAACCCTGTAGCAGAGAAATGCAAACCCTCAACTCTCTCTTAAACCACTCCCAAATCTCCCTTCAAGACCTCCATGGCGGCGACCACCACCACCATCATCTAAATCCGCCACCTCTGCAGATCCCCTCGTCTCAGCTCCACCATTTCGATCCCTCCGCCGCCGCCTCCCACGACGACTTCCTCGAGCAAATGCTCAACACAATCCCCTCTTGTAATTCCTGGCCCGACCTCAACCCTTCAAACGGCCCTAAATCCCCTTGGGACCTTAACCCCATCAATAAGCCCAACAGAGATATCTCCGACGACGTTCACCAGAATCAGATCACCGCCACTTCCCCCGCCGCTAAGGCCGCCATCATGCTCCAGCAACAGCTTCTCTTGTCCAGAGGCATCTCCTCCTCCGCCGTCGACCATGGCCTCCCCCCTATGCCTCTCTCCCTCGGAAATGCCGACTTGGACCGCCCCCAAAACGACGTCGTCGATGGATCCTGCTTCCGCCCACCAAACTCGGGAGGTTCTATTCAATCGCATGGTTTCGGAGCTCCGGGAAACGTGATGAATCAAGCTCCGGCCGGTGGTTCCGCCGGAATTTCTCCATCTCAGCCGAAGCAGAAGGTCAGAGCTCGTAGAGGCCAAGCCACTGATCCCCACAGTATCGCCGAAAGGCTTCGAAGGGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTCGTTCCCAATGCAAACAAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAGTTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTCGTTGCTGACGTGTCATCTGAGGGGGGAGGTGAATGTATGCAAGGAAGTGGAAAACCAAACGGCATCGGCGGAAACCAAACGGCGTCTTCAAACGACAGCATGACGGTGACGGAGCAGCAGGTGGCGAAGCTGATGGAGAAAGATATGGGATCGGCGATGCAGTATTTACAAGGGAAAGGACTCTGTCTCATGCCGATCTCTCTCGCGACGGCGATTTCGACGTCCACGTGTCACTCCAGGAATCCTATGATGAACGTCGGCCTCGGCGGTGGTCAGACTCAGCATCCGGCGGTGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGCTCACAGTACAGTCGACGAGCATGGGGAACGGCTCCGTCAAGGACGCCGCCTCCGTATCGAAGCCGTGA | 1257 | 56.25 | MQPCSREMQTLNSLLNHSQISLQDLHGGDHHHHHLNPPPLQIPSSQLHHFDPSAAASHDDFLEQMLNTIPSCNSWPDLNPSNGPKSPWDLNPINKPNRDISDDVHQNQITATSPAAKAAIMLQQQLLLSRGISSSAVDHGLPPMPLSLGNADLDRPQNDVVDGSCFRPPNSGGSIQSHGFGAPGNVMNQAPAGGSAGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGKPNGIGGNQTASSNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPMMNVGLGGGQTQHPAVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVSKP | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5547958 | 5551814 | - | Hsped.09g05900.1 | Hepe09g0590 | 579274 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 294 | 316 | - | - | |
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 192 | 208 | - | - | |
Hepe09g0590 | 418 | Gene3D | - | 208 | 270 | IPR036638 | GO:0046983(InterPro) | |
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 169 | 183 | - | - | |
Hepe09g0590 | 418 | FunFam | Transcription factor bHLH66 | 210 | 275 | - | - | |
Hepe09g0590 | 418 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 213 | 262 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 378 | 418 | - | - | |
Hepe09g0590 | 418 | Pfam | Helix-loop-helix DNA-binding domain | 218 | 263 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g0590 | 418 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 211 | 273 | IPR036638 | GO:0046983(InterPro) | |
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 302 | 316 | - | - | |
Hepe09g0590 | 418 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 50 | 354 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Hepe09g0590 | 418 | SMART | finulus | 219 | 268 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 24 | 45 | - | - | |
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 373 | 418 | - | - | |
Hepe09g0590 | 418 | MobiDBLite | consensus disorder prediction | 169 | 216 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0650 | Hepe-Chr2:6822390 | Hepe09g0590 | Hepe-Chr9:5547958 | 5.43e-17 | dispersed | |
Hepe03g2043 | Hepe-Chr3:77926067 | Hepe09g0590 | Hepe-Chr9:5547958 | 6.53e-56 | dispersed | |
Hepe06g2003 | Hepe-Chr6:71173190 | Hepe09g0590 | Hepe-Chr9:5547958 | 1.24e-14 | dispersed | |
Hepe07g0418 | Hepe-Chr7:4351725 | Hepe09g0590 | Hepe-Chr9:5547958 | 4.74e-16 | dispersed | |
Hepe08g1329 | Hepe-Chr8:15158851 | Hepe09g0590 | Hepe-Chr9:5547958 | 8.75e-16 | dispersed | |
Hepe09g0251 | Hepe-Chr9:2151448 | Hepe09g0590 | Hepe-Chr9:5547958 | 8.00e-09 | dispersed | |
Hepe09g0590 | Hepe-Chr9:5547958 | Hepe09g1511 | Hepe-Chr9:38643167 | 3.57e-56 | dispersed | |
Hepe08g2459 | Hepe-Chr8:65616674 | Hepe09g0590 | Hepe-Chr9:5547958 | 1.26e-94 | transposed | |
Hepe08g2224 | Hepe-Chr8:61989217 | Hepe09g0590 | Hepe-Chr9:5547958 | 5.00e-16 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56364 | PF00010 | HLH | 1.60E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0590 | - | - | - | 0.0 |