Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0590 ATGCAACCCTGTAGCAGAGAAATGCAAACCCTCAACTCTCTCTTAAACCACTCCCAAATCTCCCTTCAAGACCTCCATGGCGGCGACCACCACCACCATCATCTAAATCCGCCACCTCTGCAGATCCCCTCGTCTCAGCTCCACCATTTCGATCCCTCCGCCGCCGCCTCCCACGACGACTTCCTCGAGCAAATGCTCAACACAATCCCCTCTTGTAATTCCTGGCCCGACCTCAACCCTTCAAACGGCCCTAAATCCCCTTGGGACCTTAACCCCATCAATAAGCCCAACAGAGATATCTCCGACGACGTTCACCAGAATCAGATCACCGCCACTTCCCCCGCCGCTAAGGCCGCCATCATGCTCCAGCAACAGCTTCTCTTGTCCAGAGGCATCTCCTCCTCCGCCGTCGACCATGGCCTCCCCCCTATGCCTCTCTCCCTCGGAAATGCCGACTTGGACCGCCCCCAAAACGACGTCGTCGATGGATCCTGCTTCCGCCCACCAAACTCGGGAGGTTCTATTCAATCGCATGGTTTCGGAGCTCCGGGAAACGTGATGAATCAAGCTCCGGCCGGTGGTTCCGCCGGAATTTCTCCATCTCAGCCGAAGCAGAAGGTCAGAGCTCGTAGAGGCCAAGCCACTGATCCCCACAGTATCGCCGAAAGGCTTCGAAGGGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTCGTTCCCAATGCAAACAAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAGTTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTCGTTGCTGACGTGTCATCTGAGGGGGGAGGTGAATGTATGCAAGGAAGTGGAAAACCAAACGGCATCGGCGGAAACCAAACGGCGTCTTCAAACGACAGCATGACGGTGACGGAGCAGCAGGTGGCGAAGCTGATGGAGAAAGATATGGGATCGGCGATGCAGTATTTACAAGGGAAAGGACTCTGTCTCATGCCGATCTCTCTCGCGACGGCGATTTCGACGTCCACGTGTCACTCCAGGAATCCTATGATGAACGTCGGCCTCGGCGGTGGTCAGACTCAGCATCCGGCGGTGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGCTCACAGTACAGTCGACGAGCATGGGGAACGGCTCCGTCAAGGACGCCGCCTCCGTATCGAAGCCGTGA 1257 56.25 MQPCSREMQTLNSLLNHSQISLQDLHGGDHHHHHLNPPPLQIPSSQLHHFDPSAAASHDDFLEQMLNTIPSCNSWPDLNPSNGPKSPWDLNPINKPNRDISDDVHQNQITATSPAAKAAIMLQQQLLLSRGISSSAVDHGLPPMPLSLGNADLDRPQNDVVDGSCFRPPNSGGSIQSHGFGAPGNVMNQAPAGGSAGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGKPNGIGGNQTASSNDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNPMMNVGLGGGQTQHPAVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASVSKP 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5547958 5551814 - Hsped.09g05900.1 Hepe09g0590 579274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0590 418 MobiDBLite consensus disorder prediction 294 316 - -
Hepe09g0590 418 MobiDBLite consensus disorder prediction 192 208 - -
Hepe09g0590 418 Gene3D - 208 270 IPR036638 GO:0046983(InterPro)
Hepe09g0590 418 MobiDBLite consensus disorder prediction 169 183 - -
Hepe09g0590 418 FunFam Transcription factor bHLH66 210 275 - -
Hepe09g0590 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 213 262 IPR011598 GO:0046983(InterPro)
Hepe09g0590 418 MobiDBLite consensus disorder prediction 378 418 - -
Hepe09g0590 418 Pfam Helix-loop-helix DNA-binding domain 218 263 IPR011598 GO:0046983(InterPro)
Hepe09g0590 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 211 273 IPR036638 GO:0046983(InterPro)
Hepe09g0590 418 MobiDBLite consensus disorder prediction 302 316 - -
Hepe09g0590 418 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 50 354 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Hepe09g0590 418 SMART finulus 219 268 IPR011598 GO:0046983(InterPro)
Hepe09g0590 418 MobiDBLite consensus disorder prediction 24 45 - -
Hepe09g0590 418 MobiDBLite consensus disorder prediction 373 418 - -
Hepe09g0590 418 MobiDBLite consensus disorder prediction 169 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0650 Hepe-Chr2:6822390 Hepe09g0590 Hepe-Chr9:5547958 5.43e-17 dispersed
Hepe03g2043 Hepe-Chr3:77926067 Hepe09g0590 Hepe-Chr9:5547958 6.53e-56 dispersed
Hepe06g2003 Hepe-Chr6:71173190 Hepe09g0590 Hepe-Chr9:5547958 1.24e-14 dispersed
Hepe07g0418 Hepe-Chr7:4351725 Hepe09g0590 Hepe-Chr9:5547958 4.74e-16 dispersed
Hepe08g1329 Hepe-Chr8:15158851 Hepe09g0590 Hepe-Chr9:5547958 8.75e-16 dispersed
Hepe09g0251 Hepe-Chr9:2151448 Hepe09g0590 Hepe-Chr9:5547958 8.00e-09 dispersed
Hepe09g0590 Hepe-Chr9:5547958 Hepe09g1511 Hepe-Chr9:38643167 3.57e-56 dispersed
Hepe08g2459 Hepe-Chr8:65616674 Hepe09g0590 Hepe-Chr9:5547958 1.26e-94 transposed
Hepe08g2224 Hepe-Chr8:61989217 Hepe09g0590 Hepe-Chr9:5547958 5.00e-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56364 PF00010 HLH 1.60E-09 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0590 - - - 0.0