Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0616 ATGAAAGAAGTGATTCAGTTTGTGAGACTAGTACTGAAGGAGATGTTCAAAACAATAATGTGGGTTTGCAGCCTAAATCTAATATTGAGTTTAGCTATTCAAGTGGCACAAACGAGAATATGTCACGTCTTCTGTCATAGTTATTCTGTTTTCCTGTTTGCCCAGGATGCCAGGACAAGACATTCAGAAAAGGCAAATCTTGGTTTTCCAATGTCAGAGGGCATTGGCCACTTGCAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTAGGTTCTGGCACCTTTGGCACTGTTTATCATGGAAAATGGAGGGGGACTGATGTTGCTATCAAACGAGTCAATGATAGGTGTTTTGCTGGGAAGCCTTCTGAACAAGATCGCATGAGAGAGGATTTTTGGAATGAAGCAATTAAGCTTTCTGATTTGCACCACCCAAATGTGGTTGCTTTTTATGGTGTTGTGCTTGATGGCCCTGGGGGCTCTGTGGCAACCGTAACAGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGCTGAAGAATGAAAAGAGTCTTGACAAGCGTAAACGCCTCTTGATTGCTATGGATGTGGCTTTTGGAATGGAATATCTGCACAGAAAGAATATAGTGCACTTTGACTTAAAAAGTGATAATCTGCTTGTCAACCTTCGAGATCCTCATCGCCCAATATGCAAGGTTGGTGATTTGGGCCTATCCAAGGTGAAACGTCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCTTGGATGGCACCGGAGCTTTTGAATGGGAGAAGCAATATGGTGTCCGAGAAGGTCGATGTGTTTTCCTTTGGTATTGTGTTGTGGGAGCTCCTTAGTGGAGAAGAACCTTATGCAAATTTGCATTATGGGGCTATTATAGGTGGCATAGTAAGCAACACATTGCGACCGGAAGTACCAGATTCTTGTGATCCAGAATGGAGGTCACTAATGGAGAGATGCTGGTCATCGGAGCCATCCGAGAGGCCAAGCTTCACTGAAATTGCACATGAATTGCGCTCCATGGCTGCAAAGGTTACTCCGAAAGGACCCAATCAGCAGCAGTAG 1098 43.81 MKEVIQFVRLVLKEMFKTIMWVCSLNLILSLAIQVAQTRICHVFCHSYSVFLFAQDARTRHSEKANLGFPMSEGIGHLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRVNDRCFAGKPSEQDRMREDFWNEAIKLSDLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGRSNMVSEKVDVFSFGIVLWELLSGEEPYANLHYGAIIGGIVSNTLRPEVPDSCDPEWRSLMERCWSSEPSERPSFTEIAHELRSMAAKVTPKGPNQQQ 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5753608 5756584 - Hsped.09g06160.1 Hepe09g0616 579300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0616 365 CDD STKc_MAP3K-like 92 349 - -
Hepe09g0616 365 SMART serkin_6 86 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0616 365 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 174 365 - -
Hepe09g0616 365 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 79 173 - -
Hepe09g0616 365 Gene3D Phosphorylase Kinase; domain 1 79 173 - -
Hepe09g0616 365 ProSiteProfiles Protein kinase domain profile. 86 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0616 365 ProSitePatterns Protein kinases ATP-binding region signature. 92 123 IPR017441 GO:0005524(InterPro)
Hepe09g0616 365 PRINTS Tyrosine kinase catalytic domain signature 205 223 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0616 365 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0616 365 PRINTS Tyrosine kinase catalytic domain signature 168 181 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0616 365 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0616 365 SUPERFAMILY Protein kinase-like (PK-like) 78 347 IPR011009 -
Hepe09g0616 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0616 365 Gene3D Transferase(Phosphotransferase) domain 1 174 365 - -
Hepe09g0616 365 PANTHER SERINE-THREONINE PROTEIN KINASE 66 352 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe09g0616 365 Pfam Protein tyrosine and serine/threonine kinase 88 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2061 Hepe-Chr7:64867703 Hepe09g0616 Hepe-Chr9:5753608 3.50e-147 dispersed
Hepe08g0643 Hepe-Chr8:5740209 Hepe09g0616 Hepe-Chr9:5753608 1.99e-148 dispersed
Hepe08g2154 Hepe-Chr8:60755452 Hepe09g0616 Hepe-Chr9:5753608 7.55e-118 dispersed
Hepe09g0616 Hepe-Chr9:5753608 Hepe09g1569 Hepe-Chr9:42598454 1.96e-50 dispersed
Hepe10g0230 Hepe-Chr10:2432494 Hepe09g0616 Hepe-Chr9:5753608 1.13e-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73124 PF07714 PK_Tyr_Ser-Thr 2.10E-62 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0616 - - - 0.0