Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0655 ATGGAGAAAAGGTGTGGTTGTTGGGCTGTTTTGACACGTACTGTTTCTGGTGTTTGCAAATCCTCTGCTTCCAGAGACTCTCCCAACACTATTCCTCGAACTAGCCTAGTTTATGATTCTGCTACTGAAACGCGGTATTTAAATGCTAGCAACAGGGATCTCTGTACCCTGAATGAAGCCGAGCTAGCCACTGATAATGCCAATCCATCACCATCAGATAACAAAACAACAAGCAAACTTCTTCAATTCTCTTTTCATGAGCTCAAGGCTGCAACTGGAAATTTTAGACCTGATAGTATTCTTGGGGAAGGTGGGTTTGGATTTGTCTTTAAAGGATGGATTGAAGAGAATGGGACAGCCCCTGCAAAACCCGGATCAGGAATTACGGTAGCTGTTAAGAGCTTGAAACTGGATGGTCTTCAAGGCCACAGAGAATGGGTGGCTGAGGTTGCCTTTCTCGGGAAACTTCACCATCCGAATCTTGTTAAGCTTATTGGTTACTGTAATGAAGATGATCAACGTTTGCTTGTTTACGAGTTTATGAGCCGTGGAAGTCTTGAGAACCATCTTTTCAGAAGGACTATACCTCTTCCATGGTCCAATAGGATTAAGATTGCCCTCGGAGCAGCAAAAGGATTGGCCTTTCTTCATAATGGTCTTGTTCCTGTTATCTATAGAGATTTTAAGACATCCAACATCTTGCTTGATTCGGAATACAATGCAAAGCTTTCGGATTTTGGTTTTGCGAAAGCAGGGCCTCAAGGAGACAAAACACATGTTTCTACCAGGGTAATTGGGACATATGGCTATGCTGCTCCTGAATATGTAATGACAGGACATTTGACATCCAAGAATGATGTTTATAGCTTCGGTGTTGTGCTACTTGAGATTGTAACAGGGAGAAGATCCATGGACAAGAAACGTCCGAGCGGGGAACAAAACCTTGTCTCATGGGCTCGGCCATATTTAGCTGATAAAAGAAAGCTATATCATATAGTGGATCCCCGCTTGGAATTCAACTTTTCCATTAAAGGGGTGCAGAAGGTCTCCCAGCTTGCTTGCAGTTGCCTCAGCAGGGATCCGAAACTACGTCCAACCATGGACGAAGTTGTGAAGACTCTGACTCCACTGCAAGATCTCAACGACCTCGCCATCCTAACGTCTCACTGCCGCTTATCTTCACAAGGGAGGCGCAAGAAGAAACCTGAAGGCCTCACCTACTCTCAAAGCTTCAGAGCATCTCCAATGAACACTGGAAAGAAGCATGTAAGGTGA 1275 44.47 MEKRCGCWAVLTRTVSGVCKSSASRDSPNTIPRTSLVYDSATETRYLNASNRDLCTLNEAELATDNANPSPSDNKTTSKLLQFSFHELKAATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKLDGLQGHREWVAEVAFLGKLHHPNLVKLIGYCNEDDQRLLVYEFMSRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHNGLVPVIYRDFKTSNILLDSEYNAKLSDFGFAKAGPQGDKTHVSTRVIGTYGYAAPEYVMTGHLTSKNDVYSFGVVLLEIVTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYHIVDPRLEFNFSIKGVQKVSQLACSCLSRDPKLRPTMDEVVKTLTPLQDLNDLAILTSHCRLSSQGRRKKKPEGLTYSQSFRASPMNTGKKHVR 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6183554 6187308 + Hsped.09g06550.1 Hepe09g0655 579339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0655 424 SUPERFAMILY Protein kinase-like (PK-like) 77 382 IPR011009 -
Hepe09g0655 424 CDD STKc_IRAK 101 377 - -
Hepe09g0655 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0655 424 Gene3D Phosphorylase Kinase; domain 1 70 180 - -
Hepe09g0655 424 FunFam Serine/threonine-protein kinase BIK1 44 180 - -
Hepe09g0655 424 Pfam Protein tyrosine and serine/threonine kinase 99 374 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0655 424 MobiDBLite consensus disorder prediction 393 424 - -
Hepe09g0655 424 Gene3D Transferase(Phosphotransferase) domain 1 181 389 - -
Hepe09g0655 424 PANTHER OS01G0588500 PROTEIN-RELATED 70 378 IPR050823 -
Hepe09g0655 424 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0655 424 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524(InterPro)
Hepe09g0655 424 FunFam Probable serine/threonine-protein kinase PBL8 181 393 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3154 Hepe-Chr2:80951236 Hepe09g0655 Hepe-Chr9:6183554 5.47e-170 dispersed
Hepe09g0655 Hepe-Chr9:6183554 Hepe10g1235 Hepe-Chr10:47607786 6.57e-149 dispersed
Hepe09g0655 Hepe-Chr9:6183554 Hepe10g1715 Hepe-Chr10:53888687 2.43e-174 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73126 PF07714 PK_Tyr_Ser-Thr 2.40E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0655 - - - 0.0