Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0673 ATGAAGCGACTAGCTAGAAAAGTTGGGAAGTATGAGGTAGGGCGGACTGTTGGGGAAGGAACGTTCGCCAAGGTTAAGTTTGCACGAAACACAGAGACGGGGGAGGGTGTTGCCATGAAAATTTTGGCCAAGAGTAGCATTCTCAAGCACAAAATGGTAGAACAGATTAAGAGGGAGATATCAATAATGAAAATTGTCAGGCATCCACATATTGTCAGACTGCACGAGGTGTTGGCTAGCCGGACAAAGATATATATTATTCTTGAGTTTGTCTCTGGAGGTGAACTATATGATAGAATAGTTCTTCAAAAGAAGCTTCCAGAAATTGAGTCTAGACGATACTTTCAACAATTGATAGATGCAGTTGCTCATTGTCACAGCAAGGGTGTGTACCACAGGGACCTTAAGCCTGAAAACCTTCTTCTTGATGCTGATGGAAATCTGAAGGTTTCCGACTTTGGACTGAGTGCGCTGTCTCAACAAGGTGTTGAGCTGCTTCACACCACATGTGGAACTCCTAATTATGTTGCACCCGAGGTGCTTAGAGGTCAGGGTTATGATGGTGCAGCTGCAGATATATGGTCATGTGGAGTCATCCTCTATGTACTAATGGCTGGATATCTTCCATTTTCAGAGACAGACCTCCCCACCCTAAACATGAAGATAAATGCAGCAGAGTATTCCTGCCCCTATTGGTTTTCATCTGGTGCGAAGTCCTTGATACAAAAGATCCTTGATCCGAATCCTAAAACTCGGATTCGAATTGAAGAAATTAGAAAAGATCCATGGTTTAGAAGAAACTACATCCCTGCTAAACTAGAAGAAGATGGGGAAGTCAACTTAGATGATGTTCGGGCTGTTTTTGATGACATTGAGGAAGAACATGTAGCTGATCAGTCAGAAAAAAGTGACGATGGTCCTTTGATAATGAATGCATTTGAGATGATAACATTATCTCAAGGATTAAATCTGTCACCATTATTTGACCGGGGACAGGACTATATAAAGCGGCAAACACGTTTTGTTTCTCGTAAACCTGCCAACTTTATAATGTCTACCATTGAAGCAGTAGCAGAAGCAATGGGTTTAAATGTCCACACACGTAATTTTAAGACAAGGTTGGAAAGAAGGACCGGACACAGGGTTGCACAGTTCGCAGCTGTGCTGGAGATTTATGAAGTGGCACCGTCGCTTTTTATGGTGGACGTTCGCAAAGCTGCGGGAGATACTCTAGAATATCACAAGTTCTACAAGAATTTCTGTGCTAAGCTAGAAAACATAATCTGGAAACCAGCTGAGAGTGTGGGGAGCTGA 1314 42.69 MKRLARKVGKYEVGRTVGEGTFAKVKFARNTETGEGVAMKILAKSSILKHKMVEQIKREISIMKIVRHPHIVRLHEVLASRTKIYIILEFVSGGELYDRIVLQKKLPEIESRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDADGNLKVSDFGLSALSQQGVELLHTTCGTPNYVAPEVLRGQGYDGAAADIWSCGVILYVLMAGYLPFSETDLPTLNMKINAAEYSCPYWFSSGAKSLIQKILDPNPKTRIRIEEIRKDPWFRRNYIPAKLEEDGEVNLDDVRAVFDDIEEEHVADQSEKSDDGPLIMNAFEMITLSQGLNLSPLFDRGQDYIKRQTRFVSRKPANFIMSTIEAVAEAMGLNVHTRNFKTRLERRTGHRVAQFAAVLEIYEVAPSLFMVDVRKAAGDTLEYHKFYKNFCAKLENIIWKPAESVGS 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6368696 6374549 + Hsped.09g06730.1 Hepe09g0673 579357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0673 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0673 437 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Hepe09g0673 437 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Hepe09g0673 437 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0673 437 CDD CIPK_C 311 426 - -
Hepe09g0673 437 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Hepe09g0673 437 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165(InterPro)
Hepe09g0673 437 Pfam NAF domain 307 366 IPR004041 GO:0007165(InterPro)
Hepe09g0673 437 SUPERFAMILY Protein kinase-like (PK-like) 8 292 IPR011009 -
Hepe09g0673 437 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 415 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe09g0673 437 Gene3D Kinase associated domain 1, KA1 304 430 - -
Hepe09g0673 437 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0673 437 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524(InterPro)
Hepe09g0673 437 SMART serkin_6 11 264 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0673 437 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Hepe09g0673 437 FunFam Non-specific serine/threonine protein kinase 4 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0038 Hepe-Chr8:288362 Hepe09g0673 Hepe-Chr9:6368696 6.30e-180 dispersed
Hepe08g2458 Hepe-Chr8:65577880 Hepe09g0673 Hepe-Chr9:6368696 5.04e-131 dispersed
Hepe09g0158 Hepe-Chr9:1256377 Hepe09g0673 Hepe-Chr9:6368696 1.73e-50 dispersed
Hepe09g0586 Hepe-Chr9:5510841 Hepe09g0673 Hepe-Chr9:6368696 4.66e-130 dispersed
Hepe09g0673 Hepe-Chr9:6368696 HepeContig65g0008 Hepe-ChrContig65:1094255 2.31e-59 dispersed
Hepe09g0786 Hepe-Chr9:7670562 Hepe09g0673 Hepe-Chr9:6368696 7.97e-21 dispersed
Hepe10g1145 Hepe-Chr10:45365074 Hepe09g0673 Hepe-Chr9:6368696 2.33e-19 dispersed
Hepe09g0673 Hepe-Chr9:6368696 Hepe10g0405 Hepe-Chr10:4532641 6.27e-205 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73128 PF00069 Pkinase 1.80E-72 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0673 - - - 0.0