Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0688 | ATGAAAGGGGAAGTACAATTGGAATCATCAATTGGCCAAAACCCTAGTGATTCTGATCCTCTGCTCGAGAATCAGACCGATTCATCATCTTCCCATGGAACCTCCGATGAAATCAAGAATGATGAAGATACTGAAGCTGGTTCCATTCCCTGCTGTCGTATTTGCCTAGAGAGCGATGCTGAACCAGAAGATGAACTCATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGAAGGGTTTGCTTTCTCGCATTGCACTACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGAAGAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCTGCAATGGGTGGTTATGCGTATATTATGGACAAAGACGGTGCATTCAGGAATTCTTTCAGTGATGGATGGGATCGTATTCTGTCCAAACATCCTATTCCATTTTATTATTGTATCGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTTGGGCTCATACTACATTGTTCCGCCCTGAATAGTAATGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGATGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTTGTTATCGTTTTCGTTGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCTACTATGGCTATTCAAAGGATCTGGCAGAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATACGTGGTGGAGGATCTTCACGGTAGTTATACTGCGCCAAAATTGGATCCAGAACATGAACAACACTTGAAAATGCTACAGCTTCTGTAA | 924 | 42.97 | MKGEVQLESSIGQNPSDSDPLLENQTDSSSSHGTSDEIKNDEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRRVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSALNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGSYTAPKLDPEHEQHLKMLQLL | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6521258 | 6523938 | + | Hsped.09g06880.1 | Hepe09g0688 | 579372 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0688 | 307 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 35 | 116 | IPR013083 | - | |
Hepe09g0688 | 307 | CDD | RING_CH-C4HC3_MARCH | 52 | 103 | - | - | |
Hepe09g0688 | 307 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 44 | 109 | IPR011016 | GO:0008270(InterPro) | |
Hepe09g0688 | 307 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 11 | 306 | - | - | |
Hepe09g0688 | 307 | MobiDBLite | consensus disorder prediction | 7 | 33 | - | - | |
Hepe09g0688 | 307 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Hepe09g0688 | 307 | Pfam | RING-variant domain | 52 | 102 | IPR011016 | GO:0008270(InterPro) | |
Hepe09g0688 | 307 | SUPERFAMILY | RING/U-box | 50 | 107 | - | - | |
Hepe09g0688 | 307 | SMART | ringv_2 | 51 | 103 | IPR011016 | GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1468 | Hepe-Chr4:70300893 | Hepe09g0688 | Hepe-Chr9:6521258 | 2.55e-66 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0688 | - | - | - | 0.0 |