Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0688 ATGAAAGGGGAAGTACAATTGGAATCATCAATTGGCCAAAACCCTAGTGATTCTGATCCTCTGCTCGAGAATCAGACCGATTCATCATCTTCCCATGGAACCTCCGATGAAATCAAGAATGATGAAGATACTGAAGCTGGTTCCATTCCCTGCTGTCGTATTTGCCTAGAGAGCGATGCTGAACCAGAAGATGAACTCATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGAAGGGTTTGCTTTCTCGCATTGCACTACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGAAGAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCTGCAATGGGTGGTTATGCGTATATTATGGACAAAGACGGTGCATTCAGGAATTCTTTCAGTGATGGATGGGATCGTATTCTGTCCAAACATCCTATTCCATTTTATTATTGTATCGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTTGGGCTCATACTACATTGTTCCGCCCTGAATAGTAATGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGATGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTTGTTATCGTTTTCGTTGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCTACTATGGCTATTCAAAGGATCTGGCAGAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATACGTGGTGGAGGATCTTCACGGTAGTTATACTGCGCCAAAATTGGATCCAGAACATGAACAACACTTGAAAATGCTACAGCTTCTGTAA 924 42.97 MKGEVQLESSIGQNPSDSDPLLENQTDSSSSHGTSDEIKNDEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRRVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSALNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGSYTAPKLDPEHEQHLKMLQLL 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6521258 6523938 + Hsped.09g06880.1 Hepe09g0688 579372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0688 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 116 IPR013083 -
Hepe09g0688 307 CDD RING_CH-C4HC3_MARCH 52 103 - -
Hepe09g0688 307 ProSiteProfiles Zinc finger RING-CH-type profile. 44 109 IPR011016 GO:0008270(InterPro)
Hepe09g0688 307 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 11 306 - -
Hepe09g0688 307 MobiDBLite consensus disorder prediction 7 33 - -
Hepe09g0688 307 MobiDBLite consensus disorder prediction 1 45 - -
Hepe09g0688 307 Pfam RING-variant domain 52 102 IPR011016 GO:0008270(InterPro)
Hepe09g0688 307 SUPERFAMILY RING/U-box 50 107 - -
Hepe09g0688 307 SMART ringv_2 51 103 IPR011016 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1468 Hepe-Chr4:70300893 Hepe09g0688 Hepe-Chr9:6521258 2.55e-66 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0688 - - - 0.0