Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0723 ATGCCCTACATGCAAATGGAGCCAGAAGAGAAACATGTGATACCATCTTCTCAAATGGTGTTAAAGTCCATACATGGCTCAAATGATGGTGAGAAGAGTAGTTTATGGCAAAGGAAAGGAAAAAGTAGAGCAAAAGGACCTGCCATGGAAGGACTGAAGCAAGAAGAGCTTGATCCAAATCTGGAGTTTCCCTCTTCTTCTTCCTGCAAAAGCTTAACATTTCCAAGAAGGCCAGACTTTGGCCAGCTGGGGACTAAATGTTTGGTTAAAGCCAACCACTTCCTAGCAAAAATACCTGAATCAGACATAAGCCATTATAATGTTAAGATAACCCCAGAAGTTACTTCTCGTAAAATAAAGAAGAGTATACTGACCGAGTTGGTCAAACATTATAGAAGCACAGAGCTGGGGATGCGACTGCCAGTCTATGATGGAGGAAGCAACCTGTACACAGCCGGATTGCTGCCTTTCACATCAAAAGAGTTCACTGTCATTTTGGCTGATGAGGGAGAGGGAACAGCCACTCCCAGGGAACGAGAATTTAAAGTGCAGATAAAGTTTGTAACTTTGGCTAGCATGCACCAGTTACGAGAATTACTTGCTGGTAACCAAGTTAATAACCCTCAAGAAGCTTTGACCATTATTGACATCGTCTTGAGGGAGCTTCATGCACAAAGATATATATCAATTGGGCGGTTCTTTTACTCTCCTTGCATTAAGAAACCTCAGCATGTTGGGGGTGGTTTGCAAGCATGGCGTGGCTTCTACCAAAGCATCCGACCTACTCAAATGGGATTGTCACTAAATATTGACATGTCATCCACTGCATTCATTGAAGCAATCCCTGTCATTGATTTTGTCGCTCAACTTTTAAACAAAGATGTGTATTCAAGACCATTGTCCGATGCTGATCGTATCAAGGTTAAAAAAGTACTCAGAGGTGTAAAAGTTGAAGTTACACACAGAAGAAATGTACGAAGGAAATACCGAATTTCAGGACTAACATTACAGCCTACAAGAGAGCTAATTTTCCCTCTTGATGAGCAGATGAACATGAAATCTGTAGTTGAGTACTTTCAAGAGATGTATGGATATACCATTCAGTATACACATTTGCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGTGAATTATCTACCCATGGAGGCATGTAAGATTCTTAAAGGACAGAGATACACGAAAGGACTGAATGAAAAGCAAATAACTTCCTTGTTGAAGGTTTCATGCCAAAGACCCTCTGATCAAGAAATGGACATTTTACAGACTGTTCATCAGAATGCATATGAGGAAGATCCATACGCAAAAGAGTTTGGAATCAGCATCGACAGCAAGCTTACATCAGTTGAAGCACGAGTCCTTCCATCTCCATGGCTAAAATTTCACGACACCGGCAAAGAAAAGGAACATCTCCCTCAAGTTGGTCAGTGGAATATGATGAATAAGAAAGTAATAAATGGAAGTGTTATAAGATACTGGGCTTGTATCAATTTCTCACGCAACGTCCAAGAGAGCATAGCTCGTGGTTTCTGTCAACAGCTAGTCCAGATGTGCCAAATCTCTGGCATGGAATTTAACCCAGATCCTGTAATTCCTATATACTCAGCAAGACCAGATCAAGTGAAGAAGGCCTTAAAATTTGTATATAGTGCATTTTATAACAAACATGAAGGGAAAGAGTTAGAGTTACTGATAGCTATTCTTCCCGACAACAACGGCTCTTTATATGGTGATCTTAAAAGGATCTGTGAAACAGAGTTGGGATTGATATCCCAGTGTTGTCTAACTAAGCATGTCTTCAAGAAGAGCAGACAGTACTTGGCAAATGTGTCACTTAAGATCAACGTCAAGATGGGTGGAAGAAACACTGTTCTTTTAGATGCTTTGCGATCAAGAATTCCACTAGTCAGTGACATACCAACAATAATCTTTGGAGCTGATGTCACCCATCCAGAATCCGGAGAGGATTCTTTTCCATCAATAGCTGCCGTTGTGGCTTCCCAAGATTGGCCAGAAGTTACAAAATATGCTGGATTGGTATGTGCTCAGCCTCATCGAGAAGAACTGATTCAAGATTTATTCAAAACGTGGAAAGATCCCCATCGGGGCACGGTTGCCGGGGGTATGATAAGGGAGCTCTTGCTTTCATTTAAGAAGGCTACTGGACAAAAACCATTAAGGATAATATTCTACAGGGATGGGGTCAGTGATGGTCAGTTCTACCAGGTTCTACTACACGAACTCGATGCCATACGCAAGGCTTGTGCTTCACTAGAACCCAGTTACCAACCTCCAGTAACTTTTATCATTGTCCAAAAGCGACACCATACCAGACTTTTTGCATCCAATCACAATGATAGGAGTAGCACTGACAAGAGTGGTAATATTTTACCAGGTACTGTCGTGGATTCAAAGATATGTCATCCGACTGAGTTCGACTTTTATCTATGCAGTCACGCAGGAATCCAGGGAACAAGTCGTCCCGCACATTATCATGTTCTTTGGGATGAAAACAATTTCAGTGCTGATGACATTCAATCTCTGACTAATAACCTCTGTTACACGTATGCTCGGTGCACAAGATCAGTCTCAGTAGTGCCTCCAGCATACTACGCTCATTTAGCAGCGTACAGAGCTCGATTCTACGTAGAACCCGACGCCAAGGAGAATGCCAAAAGGTGCTGCACTCGAACCACAAATGGGACCTGCGTCCGGCCTCTGCCTGCACTGAAAGAGAGAGTGAAAAATGTAATGTTCTATTGTTGA 2784 42.1 MPYMQMEPEEKHVIPSSQMVLKSIHGSNDGEKSSLWQRKGKSRAKGPAMEGLKQEELDPNLEFPSSSSCKSLTFPRRPDFGQLGTKCLVKANHFLAKIPESDISHYNVKITPEVTSRKIKKSILTELVKHYRSTELGMRLPVYDGGSNLYTAGLLPFTSKEFTVILADEGEGTATPREREFKVQIKFVTLASMHQLRELLAGNQVNNPQEALTIIDIVLRELHAQRYISIGRFFYSPCIKKPQHVGGGLQAWRGFYQSIRPTQMGLSLNIDMSSTAFIEAIPVIDFVAQLLNKDVYSRPLSDADRIKVKKVLRGVKVEVTHRRNVRRKYRISGLTLQPTRELIFPLDEQMNMKSVVEYFQEMYGYTIQYTHLPCLQVGNQKKVNYLPMEACKILKGQRYTKGLNEKQITSLLKVSCQRPSDQEMDILQTVHQNAYEEDPYAKEFGISIDSKLTSVEARVLPSPWLKFHDTGKEKEHLPQVGQWNMMNKKVINGSVIRYWACINFSRNVQESIARGFCQQLVQMCQISGMEFNPDPVIPIYSARPDQVKKALKFVYSAFYNKHEGKELELLIAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKKSRQYLANVSLKINVKMGGRNTVLLDALRSRIPLVSDIPTIIFGADVTHPESGEDSFPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPHRGTVAGGMIRELLLSFKKATGQKPLRIIFYRDGVSDGQFYQVLLHELDAIRKACASLEPSYQPPVTFIIVQKRHHTRLFASNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADDIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYVEPDAKENAKRCCTRTTNGTCVRPLPALKERVKNVMFYC 927
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6893068 6898387 - Hsped.09g07230.1 Hepe09g0723 579407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0723 927 Pfam Argonaute linker 1 domain 229 279 IPR014811 -
Hepe09g0723 927 SMART Piwi_a_2 569 890 IPR003165 GO:0003676(InterPro)
Hepe09g0723 927 Pfam Argonaute linker 2 domain 424 467 IPR032472 -
Hepe09g0723 927 CDD PAZ_argonaute_like 280 394 - -
Hepe09g0723 927 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 77 896 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Hepe09g0723 927 Gene3D - 459 632 - -
Hepe09g0723 927 SMART DUF1785_2 228 280 IPR014811 -
Hepe09g0723 927 CDD Piwi_ago-like 439 888 IPR045246 -
Hepe09g0723 927 Pfam N-terminal domain of argonaute 86 219 IPR032474 -
Hepe09g0723 927 MobiDBLite consensus disorder prediction 22 50 - -
Hepe09g0723 927 FunFam Argonaute 10 459 632 - -
Hepe09g0723 927 Pfam PAZ domain 285 411 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe09g0723 927 SUPERFAMILY PAZ domain 275 435 IPR036085 GO:0005515(InterPro)
Hepe09g0723 927 FunFam protein argonaute 10-like 638 927 - -
Hepe09g0723 927 ProSiteProfiles Piwi domain profile. 569 890 IPR003165 GO:0003676(InterPro)
Hepe09g0723 927 MobiDBLite consensus disorder prediction 32 50 - -
Hepe09g0723 927 Pfam Mid domain of argonaute 478 555 IPR032473 -
Hepe09g0723 927 Gene3D paz domain 274 399 - -
Hepe09g0723 927 Pfam Piwi domain 570 888 IPR003165 GO:0003676(InterPro)
Hepe09g0723 927 ProSiteProfiles PAZ domain profile. 282 395 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe09g0723 927 SMART PAZ_2_a_3 285 417 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe09g0723 927 Gene3D - 638 927 IPR036397 GO:0003676(InterPro)
Hepe09g0723 927 FunFam Protein argonaute-2 274 400 - -
Hepe09g0723 927 SUPERFAMILY Ribonuclease H-like 560 891 IPR012337 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2539 Hepe-Chr7:69852736 Hepe09g0723 Hepe-Chr9:6893068 0.0 dispersed
Hepe08g0030 Hepe-Chr8:245827 Hepe09g0723 Hepe-Chr9:6893068 8.16e-159 dispersed
Hepe09g0723 Hepe-Chr9:6893068 Hepe10g0936 Hepe-Chr10:31619898 1.66e-273 dispersed
Hepe09g0723 Hepe-Chr9:6893068 HepeContig66g0202 Hepe-ChrContig66:16832329 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0723 K11593 - csv:101213206 1770.75