Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0797 ATGGCTCAGCTTATTATTGAGAATGAGCCTCGAATTTTAAACTCTTCTTCCTCCTCCTCCTCGGTGTCATCTTCCTCGTCGTCTTCGTCGGGGAGTTTGTCGACGGTGGCGGTCGAATCGAACCGGAAACGGTTGAAGAGACCCAGGGAAATTAGCAATGGCAATGGTAACAGTAAGCACCCGGTTTTCCGTGGGGTTCGAATGAGGGCATGGGGAAAATGGGTTTCTGAAATTCGTGAACCGAGAAAAAAAAGCCGGATCTGGCTCGGTACTTTCTCTACTCCTGAAATGGCCGCACGTGCCCACGACGTCGCTGCTTTGACGATTAAAGGAAACTCGGCGATTCTCAACTTCCCTGAACTCGCCGATCAATTCCCCCGTCCCGCTTCCAACTCGCCACGTGATGTTCAGGCCGCCGCCTCCAAAGCTGCCTCCATGGAAATCCCCACTACCAGTACAAGTACCCTTCCTCCACCGCCGTCGCCGTCGCCGTCTTCGTCGTCGTCGTCTTTGTGTCCGTCGACGCCGGAGGAATTGAGTGAAATCGTGGAGCTGCCGAGTTTGGGGACGAGTTACGAAACGGCCGAGTTGGGGAACGAGTTCGTATTCGTTGACTCAGTGGAAGGTTGGCACTATTCTTACCCATGGTATCACAGAGTCAATAATGTGGATGATCAAGAAGAAGATTATGGGTTCTTTAAAGACCACATTTTAATGGCGGATTTTACAGACAATTCACCTTTCGAAACTAATTTCTTATGGCAACATTAA 771 50.45 MAQLIIENEPRILNSSSSSSSVSSSSSSSSGSLSTVAVESNRKRLKRPREISNGNGNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRDVQAAASKAASMEIPTTSTSTLPPPPSPSPSSSSSSLCPSTPEELSEIVELPSLGTSYETAELGNEFVFVDSVEGWHYSYPWYHRVNNVDDQEEDYGFFKDHILMADFTDNSPFETNFLWQH 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7758930 7760087 + Hsped.09g07970.1 Hepe09g0797 579481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0797 256 MobiDBLite consensus disorder prediction 9 39 - -
Hepe09g0797 256 MobiDBLite consensus disorder prediction 1 63 - -
Hepe09g0797 256 MobiDBLite consensus disorder prediction 130 152 - -
Hepe09g0797 256 Gene3D AP2/ERF domain 62 120 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0797 256 SMART rav1_2 62 125 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0797 256 Pfam AP2 domain 61 111 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0797 256 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677(InterPro)
Hepe09g0797 256 FunFam Ethylene-responsive transcription factor 2 61 120 - -
Hepe09g0797 256 CDD AP2 63 121 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0797 256 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0797 256 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0797 256 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0797 256 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 30 205 IPR051032 -
Hepe09g0797 256 MobiDBLite consensus disorder prediction 126 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2221 Hepe-Chr1:86907017 Hepe09g0797 Hepe-Chr9:7758930 6.09e-54 dispersed
Hepe09g0797 Hepe-Chr9:7758930 Hepe10g0364 Hepe-Chr10:3964166 2.05e-53 dispersed
Hepe06g1118 Hepe-Chr6:59915307 Hepe09g0797 Hepe-Chr9:7758930 5.60e-44 transposed
Hepe02g1438 Hepe-Chr2:18336072 Hepe09g0797 Hepe-Chr9:7758930 1.55e-42 wgd
Hepe03g1526 Hepe-Chr3:72132703 Hepe09g0797 Hepe-Chr9:7758930 2.08e-46 wgd
Hepe08g2612 Hepe-Chr8:68003145 Hepe09g0797 Hepe-Chr9:7758930 2.37e-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56378 PF00847 AP2 2.20E-13 CL0081 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0797 K09286 - csv:101219745 335.495