Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g0820 | ATGGGGAGAGCAACGAGATGGTTCAAGAACTTGTTCGGAATTAAGAAAGAAAAAGAACCCACCAGAGAAAATTCCATCTCCGGCGTCAAGAAGGAACAAAAACCCACTTCTAATTCCGCCGGCGACCCCGACCTCTGCAACAATCCGGCGACAATCCCGCCGAATTTATCAGCGGCAGAGGCAGCGTGGCTGAAATCATTCTACTCCGAAACAGAAAAGGAACAGAGCAAGCACGCAATAGCAGTAGCTGCAGCCACTGCCGCTGCCGCTGACGCCGCGGTCGCTGCAGCACAAGCCGCCGTGGCAGTCGTCCGTCTCACCAGCCACGGCCGAGGCACTATGTTTGGCGGCGGCCGGGAAAGATGGGCCTCCGTCAAGATTCAAACTTGCTTCAGAGGGTATCTGGCGAGAAAAGCACTGAGAGCATTGAAAGGATTGGTGAAATTACAGGCTTTAATGAGAGGATATTTAGTTCGTAAACAAGCAACAGCAACTCTTCACAGTATGCAAGCTTTAATCAGAGCTCAAGCCACCGTTCGATCTCAGAGAACTCGCAGATTCCTAAACGACGAAACAACATTTAATAACAATAACAACAACAAACTTGAAATCCGAGCCCGAAAATCCACGGAGAAATTCGACGATACAAAAAGCGAACATACAGTTTCAGTTCACAGCAGACGTCTCTCAGCTTCATTAGACAACGCAGCATTTGAAGAAAGCCCCAAAATCGTTGAAATGGACACCGGCCGGCCAAAATCCTGGTCTCGCCGGACGAACACGTCGGCATCAGAATTAACCGACGACCCATTTCCCCAAGCGCTCTCCTCTCCACTCCCCTGCCGGACTCCATCACGTCTGCAGATCCCAGATTGCCGAAACTTCCACGATTCCGAGTGGGGTCTCGCCGGAGACGAGTGCCGGTTGATCTCCACAGCGCAGAGCACTCCGCGATTCGTTAACTCCGGCGGATCTAATGGTCCTCCGACGCCGGCGAAGAGTATGTGTGCGGATAATTTCTTCAGAGGGTACTTGAATTTCCCAAATTACATGGCGAATACTCAGTCGTTTAAGGCGAAATTGAGGTCGCACAGTGCGCCGAAACAGAGGCCGGAGCCGGGATCGAAGAAGAGGCTGTCATTGAATGAATTAATGGAATCGAGAAGCAGTCTTAGTGGAGTTCGAATGCAGAGATCTTGTTCGCATGTTCAAGAAGCCATTAATTTCAAGAATGCTGTGATGAGCAAACTGGAAAGGCCGTCGGAATTCAGCAACTTGCAGAGAAGATTATGA | 1293 | 50.35 | MGRATRWFKNLFGIKKEKEPTRENSISGVKKEQKPTSNSAGDPDLCNNPATIPPNLSAAEAAWLKSFYSETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGRERWASVKIQTCFRGYLARKALRALKGLVKLQALMRGYLVRKQATATLHSMQALIRAQATVRSQRTRRFLNDETTFNNNNNNKLEIRARKSTEKFDDTKSEHTVSVHSRRLSASLDNAAFEESPKIVEMDTGRPKSWSRRTNTSASELTDDPFPQALSSPLPCRTPSRLQIPDCRNFHDSEWGLAGDECRLISTAQSTPRFVNSGGSNGPPTPAKSMCADNFFRGYLNFPNYMANTQSFKAKLRSHSAPKQRPEPGSKKRLSLNELMESRSSLSGVRMQRSCSHVQEAINFKNAVMSKLERPSEFSNLQRRL | 430 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 8029246 | 8030869 | + | Hsped.09g08200.1 | Hepe09g0820 | 579504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g0820 | 430 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 397 | - | - | |
| Hepe09g0820 | 430 | Coils | Coil | 199 | 219 | - | - | |
| Hepe09g0820 | 430 | MobiDBLite | consensus disorder prediction | 18 | 51 | - | - | |
| Hepe09g0820 | 430 | MobiDBLite | consensus disorder prediction | 247 | 279 | - | - | |
| Hepe09g0820 | 430 | MobiDBLite | consensus disorder prediction | 30 | 51 | - | - | |
| Hepe09g0820 | 430 | MobiDBLite | consensus disorder prediction | 254 | 271 | - | - | |
| Hepe09g0820 | 430 | SMART | iq_5 | 119 | 141 | IPR000048 | GO:0005515(InterPro) | |
| Hepe09g0820 | 430 | SMART | iq_5 | 142 | 163 | IPR000048 | GO:0005515(InterPro) | |
| Hepe09g0820 | 430 | ProSiteProfiles | IQ motif profile. | 120 | 148 | - | - | |
| Hepe09g0820 | 430 | MobiDBLite | consensus disorder prediction | 358 | 377 | - | - | |
| Hepe09g0820 | 430 | Pfam | IQ calmodulin-binding motif | 121 | 141 | IPR000048 | GO:0005515(InterPro) | |
| Hepe09g0820 | 430 | Pfam | IQ calmodulin-binding motif | 147 | 161 | IPR000048 | GO:0005515(InterPro) | |
| Hepe09g0820 | 430 | Gene3D | - | 118 | 169 | - | - | |
| Hepe09g0820 | 430 | Pfam | Protein of unknown function (DUF4005) | 321 | 392 | IPR025064 | - | |
| Hepe09g0820 | 430 | ProSiteProfiles | IQ motif profile. | 144 | 171 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe09g0820 | Hepe-Chr9:8029246 | Hepe03g0809 | Hepe-Chr3:26921329 | 1.72e-08 | dispersed | |
| Hepe02g1447 | Hepe-Chr2:18573637 | Hepe09g0820 | Hepe-Chr9:8029246 | 1.33e-65 | wgd | |
| Hepe03g1505 | Hepe-Chr3:71899178 | Hepe09g0820 | Hepe-Chr9:8029246 | 3.64e-99 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g0820 | - | - | - | 0.0 |