Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g0821 | ATGTCAAAAATTCAGCTTCCTTTTACTCTCTCTGTTCTTCTTCTTCTTCTTCTCCTTCTGCTTACTCAAACGCACTGCCACACCAAAGGAATCAGACCCAAGAAATCCGCCCAGAACATTCTTCCCAAGAATTCCACCAAAACCCAATTCTCAGAACAGCAATTTATGAAATGGGTCAAATTCGTCGGCAGTCTCCGACACTCTGTTTTCCGAACGGCCAAGAACAAGCTTTTTCCTTCTTACACGCTCCACGTCGCTAAAAATCCGGCCGTCGGCGACTTCACGTCGATCCAAGACGCCGTCGATTCTCTCCCTTTCATTAATTTGATCAGAGTCGTCATCAAAGTTCACGAAGGTGTTTACACAGAGAAAGTTAGCATACCGGCGTTGAAATCATTCATTACAATTGAAGGAGAAGGAGCAGACAAAACGATGGTTCAATGGGGGGACACAGCACAAACACCAAATTCGAAGGGGCAGCCAATGGGGACCTACAATTCAGCAACATTCGCAGTAAATTCTCCATACTTCATAGCCAAGAACATCACTTTCAAGAATACCACGCCTGTCCCAGCGGCAGGGGCGATTGGAAAGCAGGCGGTGGCGTTGAGAATATCAGCCGACACGGCGGCGTTCTACGGGTGCAGATTCTTGGGGGCACAGGACACATTGTACGACCATCTGGGTCGGCATTACTACAAGGATTGTTACATCGAAGGGTCGGTGGATTTCATATTTGGAAACGGGTTGTCTCTGTTCGAGGGGTGTCACGTGCATGCAATAGCGCAATACACAGGGGCGTTGACAGCGCAGGGGAGGAGTAGCCTGCTGGAGGACACAGGGTTCTCGTTCGTGAAGTGTAAGGTCACGGGGTCTGGAGCATTGTTCTTGGGAAGGGCATGGGGGCCCTTCTCTAGGGTTGTCTTTGCTTATACCTATATGGACAATATCATCACTCCCAAAGGCTGGTACAATTGGGGCGATCCCAACCGCGAAATGACTGTATTTTATGGGCAATACAAATGTACAGGAGAAGGAGCTAATTTTGCAGGGAGAGTGTCATGGTCAAGAGAGCTCACTGATGAAGAAGCCAAGCCTTTTATTTCCCTTACCTTCATTGATGGCTCTGAATGGATTAAAATTTAA | 1146 | 47.82 | MSKIQLPFTLSVLLLLLLLLLTQTHCHTKGIRPKKSAQNILPKNSTKTQFSEQQFMKWVKFVGSLRHSVFRTAKNKLFPSYTLHVAKNPAVGDFTSIQDAVDSLPFINLIRVVIKVHEGVYTEKVSIPALKSFITIEGEGADKTMVQWGDTAQTPNSKGQPMGTYNSATFAVNSPYFIAKNITFKNTTPVPAAGAIGKQAVALRISADTAAFYGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQYTGALTAQGRSSLLEDTGFSFVKCKVTGSGALFLGRAWGPFSRVVFAYTYMDNIITPKGWYNWGDPNREMTVFYGQYKCTGEGANFAGRVSWSRELTDEEAKPFISLTFIDGSEWIKI | 381 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 8035990 | 8038620 | - | Hsped.09g08210.1 | Hepe09g0821 | 579505 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g0821 | 381 | ProSitePatterns | Pectinesterase signature 2. | 238 | 247 | IPR033131 | - | |
| Hepe09g0821 | 381 | Pfam | Pectinesterase | 85 | 375 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
| Hepe09g0821 | 381 | SUPERFAMILY | Pectin lyase-like | 78 | 380 | IPR011050 | - | |
| Hepe09g0821 | 381 | Gene3D | - | 79 | 381 | IPR012334 | - | |
| Hepe09g0821 | 381 | PANTHER | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED | 15 | 380 | - | GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER) | |
| Hepe09g0821 | 381 | FunFam | Pectinesterase | 79 | 381 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g3183 | Hepe-Chr2:81384519 | Hepe09g0821 | Hepe-Chr9:8035990 | 4.03e-85 | dispersed | |
| Hepe02g3184 | Hepe-Chr2:81395020 | Hepe09g0821 | Hepe-Chr9:8035990 | 6.44e-84 | dispersed | |
| Hepe05g0306 | Hepe-Chr5:3781638 | Hepe09g0821 | Hepe-Chr9:8035990 | 3.75e-96 | dispersed | |
| Hepe05g1373 | Hepe-Chr5:62495464 | Hepe09g0821 | Hepe-Chr9:8035990 | 2.61e-80 | dispersed | |
| Hepe06g1672 | Hepe-Chr6:67755019 | Hepe09g0821 | Hepe-Chr9:8035990 | 7.54e-105 | dispersed | |
| Hepe07g0693 | Hepe-Chr7:8222214 | Hepe09g0821 | Hepe-Chr9:8035990 | 1.19e-164 | dispersed | |
| Hepe07g0878 | Hepe-Chr7:11264453 | Hepe09g0821 | Hepe-Chr9:8035990 | 2.75e-75 | dispersed | |
| Hepe08g1012 | Hepe-Chr8:9642761 | Hepe09g0821 | Hepe-Chr9:8035990 | 1.26e-84 | dispersed | |
| Hepe08g2249 | Hepe-Chr8:62224642 | Hepe09g0821 | Hepe-Chr9:8035990 | 2.32e-58 | dispersed | |
| Hepe08g2250 | Hepe-Chr8:62232659 | Hepe09g0821 | Hepe-Chr9:8035990 | 4.15e-57 | dispersed | |
| Hepe09g0821 | Hepe-Chr9:8035990 | Hepe10g1874 | Hepe-Chr10:55549607 | 1.43e-92 | dispersed | |
| Hepe09g0821 | Hepe-Chr9:8035990 | Hepe10g0628 | Hepe-Chr10:7799371 | 1.08e-94 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g0821 | K01051 | - | csv:101215894 | 702.975 |