Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0842 | ATGGGTATGGCGGTGGTTTTGGCAAGCGAGACGCGGTTTCCTTTTCCTCTTAGTGGAATCTCGGTGAGTTCCGATGGCAATGCCAATGGCGGCGATTATTCTCCTTATTATCTGCAGGAAGCGCTAGCGGCAATCCAGCGATATCTGCCTCCGACGAACGAGTCGGAGATTGAATCTGATTCGGAGTTGTCTGGTCGGGAATCGGACGTTCCGGTGGATGCTTACTCTTGCGATCATTTTCGGATATTCGAGTTCAAGGTGAGGAAGTGCACGCGTGGACGATCTCATGATTGGACGGAGTGTCCGTACGCTCATCCCGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAAGTTTCATTACTCCGGTACGGCGTGCCCTGACTTTCGAAAAGGAAACTGTAAGAAAGGCGATTCGTGCGAGTTTGCGCATGGCGTGTTTGAGTGTTGGCTGCATCCTGCTCGTTACAGGACTCAGCCGTGCAAGGATGGCACTAACTGTCGACGGAGAGTCTGTTTCTTCGCTCACACTCCTGAGCAACTTAGGGTTTTGCCTCAGCAGAGCCCGAGAAGCGCGAACTCGCCTGATTCATATGATGAATCGCCTCTGCGGCAGTGTTTTGATGGATCCTGTGCTAAATCGCTGCCGTTTCTGTCTTCTCCGGTGTCTGTTTCACCGTCGGCGACTCCAGTGGACTCTCCACCGATGTCGCCGATGACTCGGTCACTCGGCCGGTCTCATGGCTCGAGTTCCATCAATGAAATGGTCGCATCCCTCCGGAACATGCATCTGAGCAAGGTGAAATCTCTTCCATCGTCCTGGAATGTTCAAATTGGATCTCCGGGTTATCCCTCTCGAATCCGCCCTGGATTTTGCAGCCTTCCAACAACACCAACTCGGGCTCCGACTAGTCATGGAGTAGGGCTGCTAGATTTCTTGGACCATGGATTGAAGGAGGAACCAGCAATGGAGCGAGTGGAATCGGGAAGGGAGCTGAGGGCGAAGATGCTACAGAAGCTGAGCAAAGAAAATTCTCTGGGGCTAGTTGATTCAAGTTCTTCATCCTGCACACCGGATGTCGACTGGGTCTCAGACCTGGTGAAGTGA | 1104 | 53.17 | MGMAVVLASETRFPFPLSGISVSSDGNANGGDYSPYYLQEALAAIQRYLPPTNESEIESDSELSGRESDVPVDAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQCFDGSCAKSLPFLSSPVSVSPSATPVDSPPMSPMTRSLGRSHGSSSINEMVASLRNMHLSKVKSLPSSWNVQIGSPGYPSRIRPGFCSLPTTPTRAPTSHGVGLLDFLDHGLKEEPAMERVESGRELRAKMLQKLSKENSLGLVDSSSSSCTPDVDWVSDLVK | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8293413 | 8294646 | + | Hsped.09g08420.1 | Hepe09g0842 | 579526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0842 | 367 | ProSiteProfiles | Zinc finger C3H1-type profile. | 120 | 146 | IPR000571 | GO:0046872(InterPro) | |
Hepe09g0842 | 367 | PANTHER | UNKEMPT FAMILY MEMBER | 36 | 367 | IPR045234 | - | |
Hepe09g0842 | 367 | FunFam | Zinc finger CCCH domain-containing protein 66 | 77 | 145 | - | - | |
Hepe09g0842 | 367 | Pfam | RNA-binding, Nab2-type zinc finger | 159 | 175 | - | - | |
Hepe09g0842 | 367 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 123 | 144 | IPR000571 | GO:0046872(InterPro) | |
Hepe09g0842 | 367 | Gene3D | - | 119 | 183 | - | - | |
Hepe09g0842 | 367 | SMART | c3hfinal6 | 119 | 145 | IPR000571 | GO:0046872(InterPro) | |
Hepe09g0842 | 367 | SMART | c3hfinal6 | 154 | 177 | IPR000571 | GO:0046872(InterPro) | |
Hepe09g0842 | 367 | MobiDBLite | consensus disorder prediction | 220 | 248 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0577 | Hepe-Chr5:8188247 | Hepe09g0842 | Hepe-Chr9:8293413 | 3.24e-60 | dispersed | |
Hepe08g0724 | Hepe-Chr8:6521381 | Hepe09g0842 | Hepe-Chr9:8293413 | 1.13e-54 | dispersed | |
Hepe02g0123 | Hepe-Chr2:1418342 | Hepe09g0842 | Hepe-Chr9:8293413 | 2.97e-68 | transposed | |
Hepe07g0289 | Hepe-Chr7:2924467 | Hepe09g0842 | Hepe-Chr9:8293413 | 4.47e-56 | transposed | |
Hepe08g2641 | Hepe-Chr8:68409621 | Hepe09g0842 | Hepe-Chr9:8293413 | 1.70e-160 | transposed | |
Hepe01g1861 | Hepe-Chr1:83561963 | Hepe09g0842 | Hepe-Chr9:8293413 | 3.38e-119 | wgd | |
Hepe08g1370 | Hepe-Chr8:16076543 | Hepe09g0842 | Hepe-Chr9:8293413 | 1.58e-70 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56381 | PF00642 | zf-CCCH | 2.60E-06 | CL0537 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0842 | - | - | - | 0.0 |