Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0858 ATGGAGATGGGTCGTCTGGATTTGGCTGGGAAAGTGGTGGTCGTCGCCATTAAAGCCACCTCGAAGGAAGTTTCTAAGGCTGCTCTCGTTTGGGCTTTGACTCATGTTGTTCAGCCTGGAGATCGTATTAAGCTCCTTCTGGTTATCCCTTCTCATCACTCAAGTAAATGGATGCGGGGATTTTCCCGATTTACCAACGACTGCACAATTGGTCATCTGAGAACTTCATCAGGAAACCTTTCAGATCATAAGGATGACATTGTGCATTCATGTTCTCAAATGGTACATCAGCTTCATGGTGCATATGAGCCTCTGAAGATAAAAGTCAGGATCAAAGTTCTTTCGGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCAAACTGGGTGATATTGGATAAACATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATCTCAGCCTAAGGTTCTTCGTTTGAATTTGATGGAATCCCCTAAAATGAATTCTAGAGAAGCTTGGATATCATCGCATGAATTAGATGTTTCTCAGAGGTGTCTTAAAGGCTATTTCGATGAATCGGTCATGTTTACGGCTCCTGATGTGACTCCTGTCAGTACTCCTGATGTAGAATCTCCTCTTACCGTTACTGATGTTGGAGCATCGTCAATTTCGAGCTCGGATGTGGGCAGTTCATCTTTGTTCTCTGGGATTTGTGGCAGCTGGAGAAATGAATACAGAACAGCAGCCGAAGGAGGGAGAAATTTGTCTGGATCCGAATGTGATTCTGAGAGCGAAAAGCAAACTCCCTCAGTTTCATATTTCCAGCGTTGTATGGTTGATGTTATGAGTTCCAGGCGTAAATTCCAGCAACACTCAATGGAAGAATCACAAAATGCTCATCATAGACCTCCAGCGCCAACACGTCAAGGCCTGGCCAAAAAAATGCCGAATCTTTCTCTAGAACCTAGCACTGATGTGGTGAATCGAAATACCGATATTAGCTCAAGCAGAAACATAAGGAGTACGGTTTCATTATCCAGAAAAGCACCGCTCGGCCCTCCTCCGCTGTGTTCTATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCAGAACTTGAAATTGCTACAAGTGGGTTTGCTCAAACAAATTTTTTGGCTGAGGGTGGATTTGGGTCTGTGCACCGAGGCGTCTTACCAGATGGACAAGTTGTTGCTGTCAAGCAATATAAACTGGCTAGCACCCAGGGAGATCGAGAATTTTGTTCAGAAGTTGAGGTCTTGAGTTGTGCCCAACATCGGAACGTCGTGATGCTCATTGGATTTTGTGTGGAGGGTGGAAGAAGGTTGCTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTTTATGGAAGAAATCGTGATCCCCTGAAATGGTCTGCACGACAAAAGATTGCAGTCGGAGCTGCTCGAGGTTTGAGATACCTTCACGAAGAATGTAGGGTGGGCTGTATTGTGCACCGTGATATCCGGCCGAACAACATCCTCCTTACTCATGATTTTGAACCACTAGTCGGAGATTTTGGGCTAGCAAGATGGCAACCAGATGGCGACTTAGCAGTAGAAACCAGAATCCTTGGGAGATTTGGCTACCTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACAGAGAAAGCCGATACATACTCATTTGGCGTAGTCTTGCTGGAACTCGTTACTGGACGCAAAGCGATCGATTTAAATCGTCCCAAGGGCCAGCAGTGCCTCACTGAATGGGCACGAAACCTTTTGCGAAAAGATGCAATCTCCGAACTGGTTGATCCATGCTTGAGGAACTGTTACTCAGACGAGGAAGTTCACCGCATGCTGCAATGCGCTTCCTTGTGCATCAAGCGCGACCCGTATGTAAGACCGCGTATGTCTCAGGTGCTTCGGGTTTTGGAGGGCGACATCGTTTTGTAA 2016 45.63 MEMGRLDLAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDRIKLLLVIPSHHSSKWMRGFSRFTNDCTIGHLRTSSGNLSDHKDDIVHSCSQMVHQLHGAYEPLKIKVRIKVLSGLARGMVATEAKKAQSNWVILDKHLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKMNSREAWISSHELDVSQRCLKGYFDESVMFTAPDVTPVSTPDVESPLTVTDVGASSISSSDVGSSSLFSGICGSWRNEYRTAAEGGRNLSGSECDSESEKQTPSVSYFQRCMVDVMSSRRKFQQHSMEESQNAHHRPPAPTRQGLAKKMPNLSLEPSTDVVNRNTDISSSRNIRSTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEIATSGFAQTNFLAEGGFGSVHRGVLPDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKDAISELVDPCLRNCYSDEEVHRMLQCASLCIKRDPYVRPRMSQVLRVLEGDIVL 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8486540 8491077 + Hsped.09g08580.1 Hepe09g0858 579542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0858 671 Gene3D HUPs 11 164 IPR014729 -
Hepe09g0858 671 ProSiteProfiles Protein kinase domain profile. 395 671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0858 671 Gene3D Transferase(Phosphotransferase) domain 1 471 669 - -
Hepe09g0858 671 Pfam Protein tyrosine and serine/threonine kinase 399 664 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0858 671 CDD STKc_IRAK 401 667 - -
Hepe09g0858 671 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Hepe09g0858 671 MobiDBLite consensus disorder prediction 294 320 - -
Hepe09g0858 671 SMART tyrkin_6 395 665 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Hepe09g0858 671 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0858 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 471 671 - -
Hepe09g0858 671 PANTHER OS01G0750732 PROTEIN 196 666 IPR050885 -
Hepe09g0858 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 367 470 - -
Hepe09g0858 671 SUPERFAMILY Protein kinase-like (PK-like) 378 663 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0934 Hepe-Chr1:73708228 Hepe09g0858 Hepe-Chr9:8486540 1.09e-83 dispersed
Hepe02g2746 Hepe-Chr2:75966728 Hepe09g0858 Hepe-Chr9:8486540 1.50e-92 dispersed
Hepe09g0858 Hepe-Chr9:8486540 Hepe10g1850 Hepe-Chr10:55220573 6.16e-86 dispersed
Hepe02g1475 Hepe-Chr2:19156125 Hepe09g0858 Hepe-Chr9:8486540 1.31e-272 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73135 PF07714 PK_Tyr_Ser-Thr 3.80E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0858 - - - 0.0