Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0895 | ATGAGGAAGGGAGGCTTCATCAACAACCTCAACCTCAACCTCAAGCTCAATCTCCCTCAAGAAGACCAATCCATTTCTAAGTTCCTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTCGTGAACAGAGATGGAGTTCGGATTGTTTCTCAGAGCGAAGTTGAAGCGCCACCTCCAATTAAGCCTACAGATGATCAGTTGAGTTTAGCGGACATAGACATAATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCTTTGAAGGTAATTCAGATGAAAATTGAGGAGTCTCACCGCAAGCAGATTGCACAAGAACTGAAAATCAATCAATCAGCGCAGTGTCCCTATATTGTTGTTTGTTACCAATCTTTCTATGATAATGGCTCAATATATATCATTTTAGAGTACATGGATGGAGGATCTTTAACAGATTTTTTGAAAAAGGTTAAAAAAATTCAAGAACCACATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGTCGTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAACCTTCTAATTTATTAGTAAATCATAGAGGGGAAGTCAAGATTACTGACTTTGGTGTCAGCGCGATTATGGCAAGCACATCTGGGGAGGCTAATACTTTCGTTGGCACGTATAACTATATGTCTCCAGAGAGAATTCTTGGAGAAAGATACGACAATAAAAGTGACATTTGGAGCTTGGGCCTGATATTACTCGAGTGTGCAACCGGGAAATTCCCTTATTCTCCACCAGAGCAAGATGTAGGATGGATTAATTTTTATGAGCTTATGGAAGCCATTGTTGAAGGCGAACCTCCTTCCGCTCCAGCCGACCAATTTACTCCCAACTTCTGTTCCTTCATTTCTGCATGTGTGCAAAAGAACCCAAAGGATAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAAGATACAGATATTGACCTGTCATCTTACTTCAACGATGTAGGATCTCCACTTGCAACTTTCTAA | 1074 | 41.25 | MRKGGFINNLNLNLKLNLPQEDQSISKFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLTDFLKKVKKIQEPHLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLVNHRGEVKITDFGVSAIMASTSGEANTFVGTYNYMSPERILGERYDNKSDIWSLGLILLECATGKFPYSPPEQDVGWINFYELMEAIVEGEPPSAPADQFTPNFCSFISACVQKNPKDRLSARELLEHPFIKMYEDTDIDLSSYFNDVGSPLATF | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8971228 | 8976820 | - | Hsped.09g08950.1 | Hepe09g0895 | 579579 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0895 | 357 | Gene3D | Transferase(Phosphotransferase) domain 1 | 153 | 353 | - | - | |
Hepe09g0895 | 357 | CDD | PKc_MAPKK_plant_like | 71 | 337 | - | - | |
Hepe09g0895 | 357 | FunFam | Mitogen-activated protein kinase kinase 6 | 154 | 352 | - | - | |
Hepe09g0895 | 357 | Pfam | Protein kinase domain | 75 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe09g0895 | 357 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 339 | IPR011009 | - | |
Hepe09g0895 | 357 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 102 | IPR017441 | GO:0005524(InterPro) | |
Hepe09g0895 | 357 | ProSiteProfiles | Protein kinase domain profile. | 73 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe09g0895 | 357 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 19 | 353 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Hepe09g0895 | 357 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 191 | 203 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe09g0895 | 357 | FunFam | Mitogen-activated protein kinase kinase 6 | 43 | 152 | - | - | |
Hepe09g0895 | 357 | SMART | serkin_6 | 73 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe09g0895 | 357 | PRINTS | Tyrosine kinase catalytic domain signature | 185 | 203 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe09g0895 | 357 | PRINTS | Tyrosine kinase catalytic domain signature | 148 | 161 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe09g0895 | 357 | PRINTS | Tyrosine kinase catalytic domain signature | 251 | 273 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe09g0895 | 357 | Gene3D | Phosphorylase Kinase; domain 1 | 49 | 152 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g2630 | Hepe-Chr8:68262406 | Hepe09g0895 | Hepe-Chr9:8971228 | 2.95e-157 | dispersed | |
Hepe08g2677 | Hepe-Chr8:68806504 | Hepe09g0895 | Hepe-Chr9:8971228 | 4.97e-187 | dispersed | |
Hepe09g0895 | Hepe-Chr9:8971228 | Hepe10g1802 | Hepe-Chr10:54764390 | 8.20e-42 | dispersed | |
Hepe09g0892 | Hepe-Chr9:8937139 | Hepe09g0895 | Hepe-Chr9:8971228 | 3.75e-19 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73138 | PF00069 | Pkinase | 3.00E-72 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0895 | K20603 | - | csv:101204545 | 663.685 |