Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0895 ATGAGGAAGGGAGGCTTCATCAACAACCTCAACCTCAACCTCAAGCTCAATCTCCCTCAAGAAGACCAATCCATTTCTAAGTTCCTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTCGTGAACAGAGATGGAGTTCGGATTGTTTCTCAGAGCGAAGTTGAAGCGCCACCTCCAATTAAGCCTACAGATGATCAGTTGAGTTTAGCGGACATAGACATAATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCTTTGAAGGTAATTCAGATGAAAATTGAGGAGTCTCACCGCAAGCAGATTGCACAAGAACTGAAAATCAATCAATCAGCGCAGTGTCCCTATATTGTTGTTTGTTACCAATCTTTCTATGATAATGGCTCAATATATATCATTTTAGAGTACATGGATGGAGGATCTTTAACAGATTTTTTGAAAAAGGTTAAAAAAATTCAAGAACCACATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGTCGTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAACCTTCTAATTTATTAGTAAATCATAGAGGGGAAGTCAAGATTACTGACTTTGGTGTCAGCGCGATTATGGCAAGCACATCTGGGGAGGCTAATACTTTCGTTGGCACGTATAACTATATGTCTCCAGAGAGAATTCTTGGAGAAAGATACGACAATAAAAGTGACATTTGGAGCTTGGGCCTGATATTACTCGAGTGTGCAACCGGGAAATTCCCTTATTCTCCACCAGAGCAAGATGTAGGATGGATTAATTTTTATGAGCTTATGGAAGCCATTGTTGAAGGCGAACCTCCTTCCGCTCCAGCCGACCAATTTACTCCCAACTTCTGTTCCTTCATTTCTGCATGTGTGCAAAAGAACCCAAAGGATAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAAGATACAGATATTGACCTGTCATCTTACTTCAACGATGTAGGATCTCCACTTGCAACTTTCTAA 1074 41.25 MRKGGFINNLNLNLKLNLPQEDQSISKFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLTDFLKKVKKIQEPHLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLVNHRGEVKITDFGVSAIMASTSGEANTFVGTYNYMSPERILGERYDNKSDIWSLGLILLECATGKFPYSPPEQDVGWINFYELMEAIVEGEPPSAPADQFTPNFCSFISACVQKNPKDRLSARELLEHPFIKMYEDTDIDLSSYFNDVGSPLATF 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8971228 8976820 - Hsped.09g08950.1 Hepe09g0895 579579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0895 357 Gene3D Transferase(Phosphotransferase) domain 1 153 353 - -
Hepe09g0895 357 CDD PKc_MAPKK_plant_like 71 337 - -
Hepe09g0895 357 FunFam Mitogen-activated protein kinase kinase 6 154 352 - -
Hepe09g0895 357 Pfam Protein kinase domain 75 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0895 357 SUPERFAMILY Protein kinase-like (PK-like) 57 339 IPR011009 -
Hepe09g0895 357 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524(InterPro)
Hepe09g0895 357 ProSiteProfiles Protein kinase domain profile. 73 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0895 357 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 19 353 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Hepe09g0895 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0895 357 FunFam Mitogen-activated protein kinase kinase 6 43 152 - -
Hepe09g0895 357 SMART serkin_6 73 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g0895 357 PRINTS Tyrosine kinase catalytic domain signature 185 203 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0895 357 PRINTS Tyrosine kinase catalytic domain signature 148 161 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0895 357 PRINTS Tyrosine kinase catalytic domain signature 251 273 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g0895 357 Gene3D Phosphorylase Kinase; domain 1 49 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2630 Hepe-Chr8:68262406 Hepe09g0895 Hepe-Chr9:8971228 2.95e-157 dispersed
Hepe08g2677 Hepe-Chr8:68806504 Hepe09g0895 Hepe-Chr9:8971228 4.97e-187 dispersed
Hepe09g0895 Hepe-Chr9:8971228 Hepe10g1802 Hepe-Chr10:54764390 8.20e-42 dispersed
Hepe09g0892 Hepe-Chr9:8937139 Hepe09g0895 Hepe-Chr9:8971228 3.75e-19 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73138 PF00069 Pkinase 3.00E-72 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0895 K20603 - csv:101204545 663.685