Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0901 ATGGCCAACTCTGATTTTTTCTGCGACAAAGCTCCTTTCAAAACCGATTCTGTTCCTCAATCAAGATCCTTTTCCTCTGTTTCGGCCTCCGACCATTGGGGCAAGGCTGCTGATGCTCTCAGCCACACCCATTTTGAGGAGGTTTGTCGCATGGTGTCGGAGTTTGAAGAGGCCCGAACTGTTGACATCGAAGGCACCACCCTGACCGTCGCTCAGGTCACCGCCATTGCTCGTCGAGGCGACGTCAAAGTTAACCTGAACGAAGTCGTGGCCCATGATCGTGTGACCAAAAGTGCAAATTGGGTTGCTGAGAAAACCTCTTGTGGAATCGACATATATGGAGTTACCACCGGCTTCGGTGCCACCTCCCACCGGCGTACGACCAAAACGGCCGACCTCCAAACAGAACTCATTAGGTTCCTCAATGCCGGGGTTATTGGAAAGGACAATCTTCCATCTAGCTACTCAAAAGCGGCCATGCTTGTTAGAACAAATACATTGATGCAAGGCTATTCGGGCATTCGTTGGGAAATTCTTGAAGCTGTGGTGAAGCTCATGAATGAGAATTTGATCCCTAAATTGCCTTTGAGAGGGACAATCACAGCTTCTGGAGATCTTGTTCCACTATCTTATATTGCTGGTGTTATCACTGGAAGGCATAATTCGAAGGTTACCACTGTTGAAGGCGACGAGATCACTGCCATGGAAGCTCTCAAAAGAGCTGGAATTGCAGGCCCATTTGAGCTTCAAGCAAAGGAAGGCTTAGCTCTTGTCAATGGAACCGCCGTCGGGTCTGCCGTCGCCGCCACAGTCTGCTACGACGCCAACATCATGGCTCTTTTAGCCGTCGTTCTCTCTGCCTTGTTCTGTGAAGCCATGCTAGGCAAGCCAGAATTTGCAGACCCATTGACCCATAAGCTCAAGCACCACCCTGGCCAGATTGAATCTGCCGCTGCCATGGAGTTTCTCTTGAACCAAAGCAACTTCATGAAAGAAGCAAAAGTCCGCCATGAAAATGACCCATTGACAAAGCCAAAACAAGATCGCTATGCACTTCGAACTTCACCCCAATGGCTTGGCCCCCAAATCGAAGTCATTCGAATGGCAACCCATTCGATTGAAAGGGAAATCAACTCTGTAAATGATAACCCATTAATCGATGTCGATCGAGACATAGCTCTACATGGAGGAAACTTTCAGGGGACCCCAATTGGCGTTTCCATGGATAATCTCCGAATCGCCATCGCTGCAATTGGTAAACTAATGTTCGCCCAATTCTCTGAACTCGTCTGTGATCATTACAACAACGGTTTGCCATCTAATTTGAGCGGCGGGCCAAATCCTAGCTTGGATTACGGCTTCAAAGGGGCGGAAATCGCCATGGCAGCTTATTGCTCCGAGCTCCAATACTTAGCAAACCCTGTCACAACACATGTCCAGAGTGCAGAACAACACAATCAAGATGTAAACTCTCTAGGTCTAATCTCAGCCAGAAAATCCGCAGAAGCCATTGAAATTCTCAAGCTCATGTCAGCTACATACATGGTGGCGCTCTGCCAGGCAATCGATTTAAGACAATACGAAGAAAACATGAGGGAAATTGTGAAAAATACCCTTCTACAAACCATAAAAAAAACCCTATACGTTGCAGAATACGGATCACTTCTGGAATCGAGATTCTGCGAGAAAGATCTATTGCAAGTAATCGAACGCGAGCCAGTTTTCTCCTACATCGACGATCCCACGAACACTTCCTATGCCCTAATCCCAAAATTACTGGAAGTTCTAGTCGAAAGAGCGTTGAAAGGCATTGAAACAACCAAAAGCGAGAATGGAAATGGAACAGGCATCAGCATTTTCAAGCAAATCCCAGGGTTTCTAGAGGAACTAAAGGAGAAATTGGAGAAAGATGTGGAAAGTGCGAGAGAGAGATTCGAAAATGGGGATTTTGCAGTGGAAAATAGAATCAAGAAATGCAGTACTTACCCGATCTATAGGTTTGTGAGGACTGAAGTGGGGACTCAGCTGCTCAGTGGGGCGAAGAAGGTGAGCCCTGGAGAAGATATTGAGAAAGTGGTGGAAGCCATTGATGAAGGAAAGCTTGGAGATGTTGTGATCAAATGTTTGAAGAATTAG 2136 46.82 MANSDFFCDKAPFKTDSVPQSRSFSSVSASDHWGKAADALSHTHFEEVCRMVSEFEEARTVDIEGTTLTVAQVTAIARRGDVKVNLNEVVAHDRVTKSANWVAEKTSCGIDIYGVTTGFGATSHRRTTKTADLQTELIRFLNAGVIGKDNLPSSYSKAAMLVRTNTLMQGYSGIRWEILEAVVKLMNENLIPKLPLRGTITASGDLVPLSYIAGVITGRHNSKVTTVEGDEITAMEALKRAGIAGPFELQAKEGLALVNGTAVGSAVAATVCYDANIMALLAVVLSALFCEAMLGKPEFADPLTHKLKHHPGQIESAAAMEFLLNQSNFMKEAKVRHENDPLTKPKQDRYALRTSPQWLGPQIEVIRMATHSIEREINSVNDNPLIDVDRDIALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDHYNNGLPSNLSGGPNPSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMSATYMVALCQAIDLRQYEENMREIVKNTLLQTIKKTLYVAEYGSLLESRFCEKDLLQVIEREPVFSYIDDPTNTSYALIPKLLEVLVERALKGIETTKSENGNGTGISIFKQIPGFLEELKEKLEKDVESARERFENGDFAVENRIKKCSTYPIYRFVRTEVGTQLLSGAKKVSPGEDIEKVVEAIDEGKLGDVVIKCLKN 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9037024 9039692 - Hsped.09g09010.1 Hepe09g0901 579585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0901 711 Pfam Aromatic amino acid lyase 68 531 IPR001106 -
Hepe09g0901 711 Gene3D - 22 261 IPR024083 -
Hepe09g0901 711 Gene3D - 528 654 IPR023144 -
Hepe09g0901 711 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Hepe09g0901 711 CDD PAL-HAL 66 525 IPR001106 -
Hepe09g0901 711 PANTHER HISTIDINE AMMONIA-LYASE 27 711 IPR001106 GO:0016841(PANTHER)
Hepe09g0901 711 SUPERFAMILY L-aspartase-like 32 710 IPR008948 GO:0003824(InterPro)
Hepe09g0901 711 NCBIfam phenylalanine ammonia-lyase 31 710 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Hepe09g0901 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0344 Hepe-Chr6:12824240 Hepe09g0901 Hepe-Chr9:9037024 3.21e-275 dispersed
Hepe09g0901 Hepe-Chr9:9037024 Hepe04g0943 Hepe-Chr4:63784125 1.80e-288 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0901 K10775 - csv:101205510 1232.24