Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0905 | ATGGCGGATAAGAAAGGAACGGAACAAGTTGTTTTGCGGATTTTGGATAGGGAAGGAGCAGTTGATTCTAGTGAAGATCTCACTAAATGCTCTGTTGGTTCTTTTCCTGATTTTGAGCTAAAAGAAACTCGGAGTTTTAAGTGCACAATCCCGCAATCCATGGTTGGGAGCTCTCCTTCTCCGGAGATTGCTAGAACTAGTCCCTTTAAACCTCCGAAAATTCCAGTTGAAACGGCGGTTCGGCGCCCATCGCTTGCTCGTTCTTCGTTTTTGAAGACGAAATCAAGGCTTGTGGAGCCGCCTTATCCTGATGGTACAAGTTTGGCAGAAGAAAAGGCTCGAGCAAAATCAACATCTGGTTCGCCATTCTATAGTTCTCCGAATATGGACTCCCCAGCTAAGATACCTGCTATGACTAGTCCTAAAGAAGCTTTGAAGTCGGGTCCGGTAACTCCTAAAACTCCATTGATTGGAACTAGTGAAAATGAGGAGGAAGATGATGATGAAGTATACAGAACTGCAGAACTGAAAGTGAAAGAAAGATCAGGGAAGAAGTTCAAAAGGACCATTTTAATCGAATGGGTTGCGTTTTTGTGCATAACAGGGTGTTTGATTGCTAGCTTAACAATAGACAAGTTGCTGACTAAAGAGATCTGGGGATTAGGACTGTGGAAATGGTGTGTTCTGGTATTAGTTATTTTCTGCGGTCGTTTATTTTCGCAGTGGTTTATCAATTGTCTGGTTTTCTTGATTGAAAGAAACTTTCTACTTAAACGAAAGGTTCTTTATTTTGTCTATGGGCTGAGGAAGAGTGTTATAGTGTTTATTTGGCTGGCTTTGGTTCTTCTAGCATGGGGTCTATTATTTGATCAAAGCAGCAAGAGATCTAAGAAAGGCAATGAGATTTTGAATTACGTTACACGAGCTCTTGCTGCTTCTCTCATTGGAGCAGCATTATGGCTACTGAAAACTTTGTTGGTGAAGATACTAGCTGCTTCTTTTCAATGTACTAGATTCTTCGACCGGATCCAAGAATCAATCTTCCATCAGTATATCCTGCGCACTCTATCAGGACCTCCACTGATGGAGACTGCTGAAAAGGTTGGGAGAGTGGCAAGCAGAGGGCAGTTGAGTTTCAGGCATTTGAAGAAGGAAAGGGATTATGAGCATGAAGGGAAGGAAGAAGTGATTGATGTAGATAAGCTCAAAAAGATGAAGCAAGAAAAAATTTCTGCTTGGACCATGAGAGGGCTAATCAATGTTATAAGTAGTTCAGGGCTGTCCACCATCTCTAATACAATAGAGAATTTTAATGAGGAAGAGGGTGAGCAAAAAGATAAGGAGATTAATAGTGAATGGGAAGCAAGGGCAGCAGCTTACCAAATTTTCAGGAACGTCGCGAAACCTGGTAGCAAGTATATTGATGAAGAGGACCTCTTTCGTTTTATGAGTAAGGAGGAAGTTGATAATGTGCTGCCATTGTTTGAAGGAGCAGTCGAGACTGGGAAGATAAAGCGAAAAACCCTGAAGAATTGGCTGGTGAGTGTTTATGTCGAACGCAAGTCGCTAGCTCACTCATTGAATGACACCAAGACTGCAATAGAGGAGCTAAACAAGCTTGCTTCTGTAGTTGTACTGATTGTGATTATCATTGAGTGGCTACTTATGATGGGTTTCTTGACGACGCAAGTACTCGTCTTCATTTCATCACAGCTTCTGCTGGTGGTTTTCATGTTTGGTAACACTGCCAGAACTATATTTGAAGCCATCATATTCGTATTTGTGATGCATCCCTATGACGTGGGGGATCGTTGCGTTGTAGATGGTGTGCAGATGATTGTTGAAGAAATGAACATTTTAACCACAATTTTCTTGAAGTATGACAATGAGAAGATCTTCTATCCAAATTCTGTTCTGGCCACCAAACCCATCAGTAACTTCTACAGGAGCCCCGAAATGAGCGATTCGATCGAATTCTCTGTTGATTTTTCCACGTCAATTGAAAGCATTGGAGCTCTAAAAGCAAGAATAAAATCATACTTGGAGAGCAAACCTCAGTTCTGGCGTCCGAACCATAGTGTCCTCGTGAAGGAGATCGAGAACGTCAACAAGATGAAACTCGGTCTATATGTCAATCACACCATAAACTTTCAGAACTATGGCGACAAGAGCAGTCGCAAATCGGAACTAGTCTTAGAGTTGAAGAAAATTTTCGAAGATCTCGGCATCAAGTATCATCTGCTACCTCAAGAAGTCCAGCTCAACTATGTGAGTTCAGCAGCTTCTATGGTTCCGCCCTTACGGAGATGA | 2310 | 41.99 | MADKKGTEQVVLRILDREGAVDSSEDLTKCSVGSFPDFELKETRSFKCTIPQSMVGSSPSPEIARTSPFKPPKIPVETAVRRPSLARSSFLKTKSRLVEPPYPDGTSLAEEKARAKSTSGSPFYSSPNMDSPAKIPAMTSPKEALKSGPVTPKTPLIGTSENEEEDDDEVYRTAELKVKERSGKKFKRTILIEWVAFLCITGCLIASLTIDKLLTKEIWGLGLWKWCVLVLVIFCGRLFSQWFINCLVFLIERNFLLKRKVLYFVYGLRKSVIVFIWLALVLLAWGLLFDQSSKRSKKGNEILNYVTRALAASLIGAALWLLKTLLVKILAASFQCTRFFDRIQESIFHQYILRTLSGPPLMETAEKVGRVASRGQLSFRHLKKERDYEHEGKEEVIDVDKLKKMKQEKISAWTMRGLINVISSSGLSTISNTIENFNEEEGEQKDKEINSEWEARAAAYQIFRNVAKPGSKYIDEEDLFRFMSKEEVDNVLPLFEGAVETGKIKRKTLKNWLVSVYVERKSLAHSLNDTKTAIEELNKLASVVVLIVIIIEWLLMMGFLTTQVLVFISSQLLLVVFMFGNTARTIFEAIIFVFVMHPYDVGDRCVVDGVQMIVEEMNILTTIFLKYDNEKIFYPNSVLATKPISNFYRSPEMSDSIEFSVDFSTSIESIGALKARIKSYLESKPQFWRPNHSVLVKEIENVNKMKLGLYVNHTINFQNYGDKSSRKSELVLELKKIFEDLGIKYHLLPQEVQLNYVSSAASMVPPLRR | 769 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9063865 | 9067329 | + | Hsped.09g09050.1 | Hepe09g0905 | 579589 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0905 | 769 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 64 | 759 | IPR016688 | GO:0005886(PANTHER)|GO:0006820(PANTHER)|GO:0008381(PANTHER)|GO:0050982(PANTHER) | |
Hepe09g0905 | 769 | FunFam | Predicted mechanosensitive ion channel | 598 | 647 | - | - | |
Hepe09g0905 | 769 | Pfam | Mechanosensitive ion channel, beta-domain | 591 | 647 | IPR006685 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe09g0905 | 769 | SUPERFAMILY | Sm-like ribonucleoproteins | 588 | 647 | IPR010920 | - | |
Hepe09g0905 | 769 | MobiDBLite | consensus disorder prediction | 112 | 128 | - | - | |
Hepe09g0905 | 769 | PIRSF | Memb_At2g17000 | 25 | 768 | IPR016688 | - | |
Hepe09g0905 | 769 | Gene3D | - | 598 | 647 | IPR023408 | - | |
Hepe09g0905 | 769 | MobiDBLite | consensus disorder prediction | 51 | 164 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0399 | Hepe-Chr2:3826959 | Hepe09g0905 | Hepe-Chr9:9063865 | 1.82e-21 | dispersed | |
Hepe03g0405 | Hepe-Chr3:5803083 | Hepe09g0905 | Hepe-Chr9:9063865 | 1.37e-207 | dispersed | |
Hepe09g0905 | Hepe-Chr9:9063865 | Hepe08g0320 | Hepe-Chr8:2865666 | 2.10e-164 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0905 | K22048 | - | csv:101209209 | 1278.85 |