Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0912 ATGAGCGCCAGAAGTATGTTTCCTTTCACCTCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTCAAATACATGGTTTCTGGCATTCCTATACCTCCTGATCTCCTCTTCAGTATTAAAAGAAGTAGTTTGGACTCTCCTTTCACTTCTAAGCTCTTCCCACACCACCCTCAACATGTTGGGTGGAACTATTTACAGATGAGTTTAGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGAAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCATATCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGATGTTTTGAAAACAACAGCAACAAATGATATTAACCATCTCTCAAATCCACCATTTTCTTCCCTAACCAACAACTCGTCCTTACTCTCCTATCGTCCCTTCCCTGCTCATCAACTATCTTCAACTCTTAATGGGAATGGCATATCAACCCACGACAAGAATACCCTCTTGCTTCTGGAATCTGGTTCTTACCCGGACAGAAACCCAGATTACAGAAGTAGTAGGTACACTTATGGGCTAAAAGAGGGAGTGGATGAGCATGTTTTCTTCTCGCAAGAACCGTCTGAAACTAATGCGAGAGCTGATTTCTCTGCTTCGTCTAAAGCTGATTCTCTGCAACTGACACCACTAACAATGAGTTGTTCTTCTCTATACCCAAAACAGAACAACTGCTCTTCTTTGCAGAGTGATCAATCTTGTTATCAGCTTCATCAAAGCCTCCCTGACCCTTGGAAGCAACAAAAGAGAGACGAATCACAGAAGACAGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAAAGAGGATCATGGCTTGATTTCGAGGATGAATCATCAAATACTGGCTCAGTTTCCACCACTCGTCTCTCAATTTCCATTCCCACAGCTTCCAACGACTTCCCCATTTTCAGATCCAAAAACCCATAA 1002 43.51 MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSSLDSPFTSKLFPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNDINHLSNPPFSSLTNNSSLLSYRPFPAHQLSSTLNGNGISTHDKNTLLLLESGSYPDRNPDYRSSRYTYGLKEGVDEHVFFSQEPSETNARADFSASSKADSLQLTPLTMSCSSLYPKQNNCSSLQSDQSCYQLHQSLPDPWKQQKRDESQKTVHRFFDEWPPKERGSWLDFEDESSNTGSVSTTRLSISIPTASNDFPIFRSKNP 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9131529 9134087 - Hsped.09g09120.1 Hepe09g0912 579596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0912 333 SMART QLQ_2 7 43 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Hepe09g0912 333 Pfam WRC 77 118 IPR014977 -
Hepe09g0912 333 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Hepe09g0912 333 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Hepe09g0912 333 PANTHER GROWTH-REGULATING FACTOR 5 2 320 IPR031137 GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro)
Hepe09g0912 333 Pfam QLQ 8 41 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0352 Hepe-Chr5:4330699 Hepe09g0912 Hepe-Chr9:9131529 4.35e-36 transposed
Hepe08g1128 Hepe-Chr8:11328023 Hepe09g0912 Hepe-Chr9:9131529 9.90e-62 transposed
Hepe02g1533 Hepe-Chr2:20272697 Hepe09g0912 Hepe-Chr9:9131529 3.01e-57 wgd
Hepe08g2693 Hepe-Chr8:68954490 Hepe09g0912 Hepe-Chr9:9131529 6.13e-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56387 PF08879 WRC 1.10E-20 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0912 - - - 0.0