Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g0912 | ATGAGCGCCAGAAGTATGTTTCCTTTCACCTCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTCAAATACATGGTTTCTGGCATTCCTATACCTCCTGATCTCCTCTTCAGTATTAAAAGAAGTAGTTTGGACTCTCCTTTCACTTCTAAGCTCTTCCCACACCACCCTCAACATGTTGGGTGGAACTATTTACAGATGAGTTTAGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGAAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCATATCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGATGTTTTGAAAACAACAGCAACAAATGATATTAACCATCTCTCAAATCCACCATTTTCTTCCCTAACCAACAACTCGTCCTTACTCTCCTATCGTCCCTTCCCTGCTCATCAACTATCTTCAACTCTTAATGGGAATGGCATATCAACCCACGACAAGAATACCCTCTTGCTTCTGGAATCTGGTTCTTACCCGGACAGAAACCCAGATTACAGAAGTAGTAGGTACACTTATGGGCTAAAAGAGGGAGTGGATGAGCATGTTTTCTTCTCGCAAGAACCGTCTGAAACTAATGCGAGAGCTGATTTCTCTGCTTCGTCTAAAGCTGATTCTCTGCAACTGACACCACTAACAATGAGTTGTTCTTCTCTATACCCAAAACAGAACAACTGCTCTTCTTTGCAGAGTGATCAATCTTGTTATCAGCTTCATCAAAGCCTCCCTGACCCTTGGAAGCAACAAAAGAGAGACGAATCACAGAAGACAGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAAAGAGGATCATGGCTTGATTTCGAGGATGAATCATCAAATACTGGCTCAGTTTCCACCACTCGTCTCTCAATTTCCATTCCCACAGCTTCCAACGACTTCCCCATTTTCAGATCCAAAAACCCATAA | 1002 | 43.51 | MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSSLDSPFTSKLFPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNDINHLSNPPFSSLTNNSSLLSYRPFPAHQLSSTLNGNGISTHDKNTLLLLESGSYPDRNPDYRSSRYTYGLKEGVDEHVFFSQEPSETNARADFSASSKADSLQLTPLTMSCSSLYPKQNNCSSLQSDQSCYQLHQSLPDPWKQQKRDESQKTVHRFFDEWPPKERGSWLDFEDESSNTGSVSTTRLSISIPTASNDFPIFRSKNP | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9131529 | 9134087 | - | Hsped.09g09120.1 | Hepe09g0912 | 579596 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g0912 | 333 | SMART | QLQ_2 | 7 | 43 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Hepe09g0912 | 333 | Pfam | WRC | 77 | 118 | IPR014977 | - | |
Hepe09g0912 | 333 | ProSiteProfiles | WRC domain profile. | 76 | 120 | IPR014977 | - | |
Hepe09g0912 | 333 | ProSiteProfiles | QLQ domain profile. | 8 | 43 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Hepe09g0912 | 333 | PANTHER | GROWTH-REGULATING FACTOR 5 | 2 | 320 | IPR031137 | GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro) | |
Hepe09g0912 | 333 | Pfam | QLQ | 8 | 41 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0352 | Hepe-Chr5:4330699 | Hepe09g0912 | Hepe-Chr9:9131529 | 4.35e-36 | transposed | |
Hepe08g1128 | Hepe-Chr8:11328023 | Hepe09g0912 | Hepe-Chr9:9131529 | 9.90e-62 | transposed | |
Hepe02g1533 | Hepe-Chr2:20272697 | Hepe09g0912 | Hepe-Chr9:9131529 | 3.01e-57 | wgd | |
Hepe08g2693 | Hepe-Chr8:68954490 | Hepe09g0912 | Hepe-Chr9:9131529 | 6.13e-120 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56387 | PF08879 | WRC | 1.10E-20 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g0912 | - | - | - | 0.0 |