Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0940 ATGGCTTTGGATTCGAACAATGGCGGTGAAGTTCGAGCGGCTAACTCTCTCCAATCCATCTGTTACAATCAGGGCTCCTTGCGGCTGCTCGATCAGAGGAAGCTCCCTTTGGAAACTGTTTACTTGGACATCAAGGATGCAACAGATGGATGGCATGCAATTAGGGATATGGTTGTTCGCGGGGCACCTGCCATTGCTATTGCAGCAGCCCTTGCTTTGGCAGCAGAAGTGTACCACTCTGACACTTTTAATGGGACGTCCAACGATGCAGCTTCATTCATTGCAGAGAAATTGGACTACTTAGTCTCCAGCCGGCCAACTGCTGTTAATCTTGGCGATGCTGCTATAAAACTCAAAGACATTGTATCTGGGGCTGCTGCAATTTCTTCCGAAGCCAGGAGTGTCTTCCAAGCATATATAGAGGCTGCTGAAGCAATGCTGGAGGATGACGTTGCTTCAAATAAAGCCATTGGGTCCTATGGAGCAACTTTTATCCGTGATCAACAAAAATCATTGGAAAAGTTTTCCGTTCTAACGCATTGCAACACGGGCAGTCTAGCAACTGCTGGATATGGTACTGCCCTTGGTGTAATTCGTGCACTTCACTCTGCCGGTGTGTTAGAAAGGGCATACTGTACCGAAACACGACCCTTCAATCAAGGATCTCGACTCACAGCCTATGAGTTGGTCCATGAAAAGATACCTTCTACCCTGATAGCCGATTCTGCTGCTGCTGCCTTAATGAAATTTGGAAGAGTGAATGCCGTTGTAGTTGGGGCAGATCGCGTAGCTGCAAATGGTGATACTGCAAATAAGATTGGAACCTATAGTCTTGCATTGTGTGCAATGCATCACAAGATTCCATTCTTTGTGGCTGCACCTTTGACTTCCATAGACTTATCCCTTTCTTCTGGAGAAGAAATCGTTATCGAGGAAAGGTCTCCCAAAGAGTTATTGAATTCACGCGGAGGTCTCGGTGAGCAAGTCGCTGCATCTGGCATCGCTGTCTGGAACCCTGCTTTCGATGTTACTCCTGCTCATCTGATCTCTGGAATCATAACAGAAAAGGGAGTCATCACAAAGGCGGGTTCTGAATCTTTCAACATAAAGGAGTTTGTTCAAAAGACAGCGGGGACTCCTGCGTAG 1146 46.95 MALDSNNGGEVRAANSLQSICYNQGSLRLLDQRKLPLETVYLDIKDATDGWHAIRDMVVRGAPAIAIAAALALAAEVYHSDTFNGTSNDAASFIAEKLDYLVSSRPTAVNLGDAAIKLKDIVSGAAAISSEARSVFQAYIEAAEAMLEDDVASNKAIGSYGATFIRDQQKSLEKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMKFGRVNAVVVGADRVAANGDTANKIGTYSLALCAMHHKIPFFVAAPLTSIDLSLSSGEEIVIEERSPKELLNSRGGLGEQVAASGIAVWNPAFDVTPAHLISGIITEKGVITKAGSESFNIKEFVQKTAGTPA 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9468083 9471774 - Hsped.09g09400.1 Hepe09g0940 579624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0940 381 FunFam Methylthioribose-1-phosphate isomerase 15 207 - -
Hepe09g0940 381 Pfam Initiation factor 2 subunit family 59 360 IPR000649 GO:0044237(InterPro)
Hepe09g0940 381 Gene3D - 208 373 IPR042529 -
Hepe09g0940 381 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 18 361 IPR005251 -
Hepe09g0940 381 Gene3D - 15 207 IPR027363 -
Hepe09g0940 381 FunFam Methylthioribose-1-phosphate isomerase 173 370 - -
Hepe09g0940 381 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 17 370 IPR005251 -
Hepe09g0940 381 SUPERFAMILY NagB/RpiA/CoA transferase-like 16 362 IPR037171 -
Hepe09g0940 381 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 14 376 - GO:0019509(PANTHER)|GO:0046523(PANTHER)
Hepe09g0940 381 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 44 361 IPR011559 GO:0044249(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0940 K08963 - csv:101210526 672.544