Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g0955 ATGACGAAGCCGTCCTCTCCTCAGAAATCATCCCCCTCCTCCGTCGCCGCCTACGCCGACCCGAGCGATTCGCGCTACAAGGGAGTGCGCCGCCGCAAGTGGGGCAAGTGGGTCTCCGAAATCCGCCTCCCCAACAGCCGCGAGCGAATCTGGCTCGGCTCTTACGACTCCGCCCTCAAGGCGGCGCGTGCCTTCGACGCGGCTCTTTTTTGCCTACGTGGCCGCTCCGCTCGCTTCAATTTCCCTGACACTCCACCGGAGATTGCCGGTGCCAGTTTACTCTCCCGGGCCGAGATTCAGTCCGTCGCTGCCCAGTTCGCCAACTCCGACCCGCCGGAAAACACCCAACCCGCCGCCGACTCGTCGTCGCCGTCGCCGTCGGTGGTCTCCGAAGTTTCCACCGCCGTGATCGAGTGTGATGAAAGATCGCCGTTTTTGGATCTTCACACTGCCATGGGATCCGGCAATTTCGGGTCGGATTTCGGGTTGTTTCCTGAGTATAACCCGTTTTTTAATGAATTGTTGGGTAATTCTGCAGCTCCTTCTTTTGATTATGGAGATGAGAATTTTGACGCCATGACCACTCATCAGGATTCATTTCTCTGGAATTTCTGA 615 57.72 MTKPSSPQKSSPSSVAAYADPSDSRYKGVRRRKWGKWVSEIRLPNSRERIWLGSYDSALKAARAFDAALFCLRGRSARFNFPDTPPEIAGASLLSRAEIQSVAAQFANSDPPENTQPAADSSSPSPSVVSEVSTAVIECDERSPFLDLHTAMGSGNFGSDFGLFPEYNPFFNELLGNSAAPSFDYGDENFDAMTTHQDSFLWNF 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9639426 9640389 - Hsped.09g09550.1 Hepe09g0955 579639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g0955 204 SMART rav1_2 25 88 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0955 204 FunFam Ethylene-responsive transcription factor 2 24 83 - -
Hepe09g0955 204 Pfam AP2 domain 24 74 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0955 204 MobiDBLite consensus disorder prediction 106 127 - -
Hepe09g0955 204 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0955 204 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0955 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 135 IPR051032 -
Hepe09g0955 204 MobiDBLite consensus disorder prediction 1 18 - -
Hepe09g0955 204 SUPERFAMILY DNA-binding domain 24 83 IPR016177 GO:0003677(InterPro)
Hepe09g0955 204 MobiDBLite consensus disorder prediction 1 23 - -
Hepe09g0955 204 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0955 204 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe09g0955 204 CDD AP2 24 84 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1929 Hepe-Chr1:84123734 Hepe09g0955 Hepe-Chr9:9639426 3.88e-39 dispersed
Hepe04g1259 Hepe-Chr4:68112480 Hepe09g0955 Hepe-Chr9:9639426 1.50e-23 dispersed
Hepe08g1454 Hepe-Chr8:17544764 Hepe09g0955 Hepe-Chr9:9639426 1.25e-39 dispersed
Hepe09g0955 Hepe-Chr9:9639426 Hepe10g1428 Hepe-Chr10:50939558 9.88e-24 dispersed
Hepe03g1392 Hepe-Chr3:70571506 Hepe09g0955 Hepe-Chr9:9639426 7.94e-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56390 PF00847 AP2 6.90E-12 CL0081 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g0955 - - - 0.0