Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1037 ATGATGATGATGTTCAATGAGATGGGATTTTGTGATGATATGGATTTCCTTTCCGCTTCAATTGTGGAAGGAGATGGCGTAGCTCCACCAGCTGATCCTGAAGCCGTGGTAGAAGATGATTATTCTGATGAAGAGATTGATGTCGATGAGCTTGAGAGGAGGATGTGGAGGGACAAGATGCGTCTCAAACGTCTTAAAGAGCAGACCAAGGTTAAGGAAGGGATCGATATTGCGAAGCAGCGACAGTCTCAAGACCAGGCTAGGAGGAAGAAGATGTCGAGGGCACACGACGGGATCTTGAAGTACATGTTGAAGATTATGGAAGTTTGTAATGCTCAAGGTTTTGTATATGGAATAATTCCAGAGAAGGGAAAACCAGTAACCGGGGCATCGGATAATCTGCGAGAATGGTGGAAAGACAAGGTCAGATTTGATAGGAATGGACCGGCTGCCATAGCCAAGTACCAGGCAGACAATGCAATTCCCGGACGAAACGACGGGTGTAATTCGATCGGTCCAACCCCACACACCTTGCAGGAACTTCAGGATACCACCCTAGGATCTCTTTTATCAGCTCTGATGCAGCACTGTGACCCTCCCCAAAGAAGATTTCCATTGGAGAAAGGTGTTCCTCCGCCATGGTGGCCTAATGGGGTTGAGGAATGGTGGCCTCAGCTCGGGTTGCCAAAGGACCAAGGTCCTCCACCTTACAAGAAGCCTCACGACTTGAAGAAGGCGTGGAAAGTTGGTGTTTTGACTGCGGTCATCAAGCATATGTCCCCTGATATAGCTAAGATCCGCAAGCTTGTTAGGCAATCCAAGTGTTTGCAGGACAAGATGACTGCCAAGGAGAGTGCTACATGGCTTGCTATTATCAACCAGGAGGAGGTCTTGGCTCGGGAGCTTTATCCCGACTCTTGCCTGCCTTTGTCTTCTGGTGGGGGAAGTGGATCGTTGGTCATTAACGATTGCAGCGAGTACGATGTAGAAGGTGCTGAGGAGGAACCAAACTTTGATGTTCAAGATCGTAAACCTGATAACCATAGCTCATTCAACATGGGAATGGAGAGAATGAGAGAACGTGTGCCTCTTCGACAACCACCTTATGCAATCAAAGGAGAGGTTCCCACAAACTTGGATTTTATGCGAAAGAGGAAACCAACCAGTGATCTGACCATGATGATGGATCAGAAGATCTATACTTGTGAGTTCCTCCAGTGTCCTTACAGCGAACTCCGTCTCGGGTTTAATGAAAGGACATCCAGAGACAACCATCAGTTGACGTGCCCATACAGAACTTCCTCAGAGTTCAGTGGTTCAAATTTTCATGTCAATGAGGTTAAACCAGTTATCTTCCCTCAATCATTTGTGCCGCCCAAGCCAGCTCCACCCCCAGTCAGCTCGGTTCCATCTTCCTTTGACTTGACCAGTTTAGGAGTTCCAGAAGATGGCCAGAAGCTGATCAGTGAGCTCATGTCGATCTATGACACCAACATCCAAGGCAACAAGAACAATGTAAACACCGGTAATGGTGCCATCACAGAGAACCAAAATCTTCCTCAGTTGAAGATCCAACCTCAACAAGAAGAATACTTCCGCAATCAAGGTATAATGATTGATGGAAACTTCTTCGAAGGGTCGAACGCTTCAAGCAGCCATCAAATGTTTACAAGAGACGAAGGCCAATTCGACCGGTTCAAGCCAATGAATTCGCCTTTTGAAAACAACCACCACCACAACAATAACAACAACAACAACTTCCACTTGATGTTCGGCTCTCCGTTTGATTTGTCGACCTTCGACTACAAAGATGAAGTACCTGGAGCAGCAGCCATCGATACACTGTCGAAACAGCAGGATATTTCGTTATGGTATCAGTAA 1881 46.73 MMMMFNEMGFCDDMDFLSASIVEGDGVAPPADPEAVVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQTKVKEGIDIAKQRQSQDQARRKKMSRAHDGILKYMLKIMEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGVEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLARELYPDSCLPLSSGGGSGSLVINDCSEYDVEGAEEEPNFDVQDRKPDNHSSFNMGMERMRERVPLRQPPYAIKGEVPTNLDFMRKRKPTSDLTMMMDQKIYTCEFLQCPYSELRLGFNERTSRDNHQLTCPYRTSSEFSGSNFHVNEVKPVIFPQSFVPPKPAPPPVSSVPSSFDLTSLGVPEDGQKLISELMSIYDTNIQGNKNNVNTGNGAITENQNLPQLKIQPQQEEYFRNQGIMIDGNFFEGSNASSSHQMFTRDEGQFDRFKPMNSPFENNHHHNNNNNNNFHLMFGSPFDLSTFDYKDEVPGAAAIDTLSKQQDISLWYQ 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10749433 10753053 - Hsped.09g10370.1 Hepe09g1037 579721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1037 626 Gene3D - 173 306 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe09g1037 626 Pfam Ethylene insensitive 3, DNA-binding domain 49 296 IPR047091 GO:0003700(InterPro)
Hepe09g1037 626 Coils Coil 34 68 - -
Hepe09g1037 626 FunFam Ethylene insensitive 3-like 1 81 159 - -
Hepe09g1037 626 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe09g1037 626 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 3 615 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Hepe09g1037 626 Gene3D - 81 158 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe09g1037 626 FunFam Ethylene insensitive 3-like 1 169 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2847 Hepe-Chr2:77535414 Hepe09g1037 Hepe-Chr9:10749433 4.87e-239 dispersed
Hepe09g1037 Hepe-Chr9:10749433 Hepe09g1085 Hepe-Chr9:12071998 9.23e-113 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56392 PF04873 EIN3 3.20E-129 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1037 K14514 - csv:101206055 1150.96