Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1085 ATGGAGAATCTTATGATGGTTGATGTTGATGATGCTTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGACAACATTGCAGAGAAAGATGTTAGTGATGAAGAAATCGAAGCTGATGATCTGGAGAAACGTATGTGGAAGGATAGGATCAAGCTTAAAAGGATTAAGGAAAGACAGAAGATTGCTGCACAACAGGCTGCAGAGAAGCAGAAACCGAAGCAGACATCCGACCAGGCTCGGAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAGTATATGCTGAAACTGATGGAAGTATGCAAAGCTCGGGGATTTGTATATGGCATTATACCTGAAAAGGGGAAACCAGTTAGCGGTGCTTCTGATAACATTCGAGCTTGGTGGAAAGAAAAAGTTAAATTTGATAAGAATGGACCGGCTGCCATAGCTAAGTATGAAGCAGACTGTCTTGCCAAGGGAGAGGCAGATGGAAATGGAAGCGGTAACTCCCAAAGCGTTCTTCAAGACCTGCAGGATGCGACGCTCGGGTCTCTTTTGTCTTCTTTGATGCAACATTGTGATCCCCCTCAGCGGAAGTACCCTTTAGAAAAAGGGGTTCCTCCACCCTGGTGGCCCTCTGGAAATGAGGATTGGTGGACAAAACTTGGGCTATCACATGGCAATAGTCCTCCTTATAAGAAGCCACACGATTTGAAGAAGATGTGGAAAGTCGGGGTTTTAACAGCTGTGATAAAACACATGTCACCTGATATTGCAAAGATAAGGAAGCACGTACGCCAGTCAAAGTGCTTACAAGATAAGATGACAGCAAAGGAGAGTGCAATTTGGTTGGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGACAACCAAGCAGTGATAATGGGGCATCTGGAATAACAGAGACACCAGTAGGTGGTCGTGGTGCAAAGCAAGCTGCAGTAAGCAGTGACAGTGACTATGATGTTGATCTTGCCGATGATGGTGTCAGGTCAGTTTCTTCTAAAGAGGACAGGAGACACCGATCAGTGGATGCAGAGCCATCCAGTAATCTGCGTAATAATGCTACTCAACCTGCTCAAGAAAAGGAGCAAGGTGAAAAGCATAGGACAAAAAGACATCGTGGTGGCAGGACAAAACCTGCCGATCAAACACTGGCTCCATCTCGGAACGAAGAAGAACCAAGCATCGAGCCAAGAAATAATTATCTAGATATAAGCCATTCTGATGTACCATTAGATAGATTTGAAATTCCAGGAAACCAACCGCAAAAGGATACTGTCACAGCTTTGAGGCCACTGGAGAAGGATTTGGATGTCCGATCAGAAGTACCAGCTCCCCGATTCGATGCGTTCTCCGCAACGCCCTCTGATAATATCAACATAATTTCCACTCAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCTGTAATGCAGAATGCTGAGGTACAACATGAAAGTGCTTACAATATTTATAATCCATCGGTGGAATATAGATCCAATTATGATGTGCAGCATCCTCAATTTGTTAATGATTCTCAAATGAGATTGGAGGAGGGAGTACATGTGCCAACACAACATAGAAACGACGAGACTATAGGAGGAGATTTCAACTACGTAAAAGAAACGTTCAACACCGAACAAGATAGGCCTGTTGATACACAGTTTGGATCACCAATCAACAGTCTATCATTAGATTATGGAGCATTTAACAGTCCGTTCCATCTTGGATACGATGGTGGAAGCTCGTTCGATGACTTTTTGGTCGATGACGATTTGATCCAGTACTTCGGAGCATAG 1818 43.84 MENLMMVDVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIEADDLEKRMWKDRIKLKRIKERQKIAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEADCLAKGEADGNGSGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWTKLGLSHGNSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRKHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASGITETPVGGRGAKQAAVSSDSDYDVDLADDGVRSVSSKEDRRHRSVDAEPSSNLRNNATQPAQEKEQGEKHRTKRHRGGRTKPADQTLAPSRNEEEPSIEPRNNYLDISHSDVPLDRFEIPGNQPQKDTVTALRPLEKDLDVRSEVPAPRFDAFSATPSDNINIISTQSMYVDGRPLLYPVMQNAEVQHESAYNIYNPSVEYRSNYDVQHPQFVNDSQMRLEEGVHVPTQHRNDETIGGDFNYVKETFNTEQDRPVDTQFGSPINSLSLDYGAFNSPFHLGYDGGSSFDDFLVDDDLIQYFGA 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12071998 12074964 + Hsped.09g10850.1 Hepe09g1085 579769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1085 605 MobiDBLite consensus disorder prediction 291 406 - -
Hepe09g1085 605 MobiDBLite consensus disorder prediction 64 87 - -
Hepe09g1085 605 SUPERFAMILY DNA-binding domain of EIN3-like 170 292 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe09g1085 605 MobiDBLite consensus disorder prediction 328 351 - -
Hepe09g1085 605 FunFam Ethylene insensitive 3-like 1 76 154 - -
Hepe09g1085 605 FunFam Ethylene insensitive 3-like 1 163 299 - -
Hepe09g1085 605 Coils Coil 27 47 - -
Hepe09g1085 605 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 568 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Hepe09g1085 605 Gene3D - 162 300 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe09g1085 605 Gene3D - 76 153 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Hepe09g1085 605 Pfam Ethylene insensitive 3, DNA-binding domain 42 289 IPR047091 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g1037 Hepe-Chr9:10749433 Hepe09g1085 Hepe-Chr9:12071998 9.23e-113 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56395 PF04873 EIN3 1.60E-127 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1085 K14514 - csv:101210347 1047.34