Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g1085 | ATGGAGAATCTTATGATGGTTGATGTTGATGATGCTTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGACAACATTGCAGAGAAAGATGTTAGTGATGAAGAAATCGAAGCTGATGATCTGGAGAAACGTATGTGGAAGGATAGGATCAAGCTTAAAAGGATTAAGGAAAGACAGAAGATTGCTGCACAACAGGCTGCAGAGAAGCAGAAACCGAAGCAGACATCCGACCAGGCTCGGAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAGTATATGCTGAAACTGATGGAAGTATGCAAAGCTCGGGGATTTGTATATGGCATTATACCTGAAAAGGGGAAACCAGTTAGCGGTGCTTCTGATAACATTCGAGCTTGGTGGAAAGAAAAAGTTAAATTTGATAAGAATGGACCGGCTGCCATAGCTAAGTATGAAGCAGACTGTCTTGCCAAGGGAGAGGCAGATGGAAATGGAAGCGGTAACTCCCAAAGCGTTCTTCAAGACCTGCAGGATGCGACGCTCGGGTCTCTTTTGTCTTCTTTGATGCAACATTGTGATCCCCCTCAGCGGAAGTACCCTTTAGAAAAAGGGGTTCCTCCACCCTGGTGGCCCTCTGGAAATGAGGATTGGTGGACAAAACTTGGGCTATCACATGGCAATAGTCCTCCTTATAAGAAGCCACACGATTTGAAGAAGATGTGGAAAGTCGGGGTTTTAACAGCTGTGATAAAACACATGTCACCTGATATTGCAAAGATAAGGAAGCACGTACGCCAGTCAAAGTGCTTACAAGATAAGATGACAGCAAAGGAGAGTGCAATTTGGTTGGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGACAACCAAGCAGTGATAATGGGGCATCTGGAATAACAGAGACACCAGTAGGTGGTCGTGGTGCAAAGCAAGCTGCAGTAAGCAGTGACAGTGACTATGATGTTGATCTTGCCGATGATGGTGTCAGGTCAGTTTCTTCTAAAGAGGACAGGAGACACCGATCAGTGGATGCAGAGCCATCCAGTAATCTGCGTAATAATGCTACTCAACCTGCTCAAGAAAAGGAGCAAGGTGAAAAGCATAGGACAAAAAGACATCGTGGTGGCAGGACAAAACCTGCCGATCAAACACTGGCTCCATCTCGGAACGAAGAAGAACCAAGCATCGAGCCAAGAAATAATTATCTAGATATAAGCCATTCTGATGTACCATTAGATAGATTTGAAATTCCAGGAAACCAACCGCAAAAGGATACTGTCACAGCTTTGAGGCCACTGGAGAAGGATTTGGATGTCCGATCAGAAGTACCAGCTCCCCGATTCGATGCGTTCTCCGCAACGCCCTCTGATAATATCAACATAATTTCCACTCAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCTGTAATGCAGAATGCTGAGGTACAACATGAAAGTGCTTACAATATTTATAATCCATCGGTGGAATATAGATCCAATTATGATGTGCAGCATCCTCAATTTGTTAATGATTCTCAAATGAGATTGGAGGAGGGAGTACATGTGCCAACACAACATAGAAACGACGAGACTATAGGAGGAGATTTCAACTACGTAAAAGAAACGTTCAACACCGAACAAGATAGGCCTGTTGATACACAGTTTGGATCACCAATCAACAGTCTATCATTAGATTATGGAGCATTTAACAGTCCGTTCCATCTTGGATACGATGGTGGAAGCTCGTTCGATGACTTTTTGGTCGATGACGATTTGATCCAGTACTTCGGAGCATAG | 1818 | 43.84 | MENLMMVDVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIEADDLEKRMWKDRIKLKRIKERQKIAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEADCLAKGEADGNGSGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWTKLGLSHGNSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRKHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASGITETPVGGRGAKQAAVSSDSDYDVDLADDGVRSVSSKEDRRHRSVDAEPSSNLRNNATQPAQEKEQGEKHRTKRHRGGRTKPADQTLAPSRNEEEPSIEPRNNYLDISHSDVPLDRFEIPGNQPQKDTVTALRPLEKDLDVRSEVPAPRFDAFSATPSDNINIISTQSMYVDGRPLLYPVMQNAEVQHESAYNIYNPSVEYRSNYDVQHPQFVNDSQMRLEEGVHVPTQHRNDETIGGDFNYVKETFNTEQDRPVDTQFGSPINSLSLDYGAFNSPFHLGYDGGSSFDDFLVDDDLIQYFGA | 605 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 12071998 | 12074964 | + | Hsped.09g10850.1 | Hepe09g1085 | 579769 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g1085 | 605 | MobiDBLite | consensus disorder prediction | 291 | 406 | - | - | |
Hepe09g1085 | 605 | MobiDBLite | consensus disorder prediction | 64 | 87 | - | - | |
Hepe09g1085 | 605 | SUPERFAMILY | DNA-binding domain of EIN3-like | 170 | 292 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Hepe09g1085 | 605 | MobiDBLite | consensus disorder prediction | 328 | 351 | - | - | |
Hepe09g1085 | 605 | FunFam | Ethylene insensitive 3-like 1 | 76 | 154 | - | - | |
Hepe09g1085 | 605 | FunFam | Ethylene insensitive 3-like 1 | 163 | 299 | - | - | |
Hepe09g1085 | 605 | Coils | Coil | 27 | 47 | - | - | |
Hepe09g1085 | 605 | PANTHER | ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN | 16 | 568 | IPR006957 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro) | |
Hepe09g1085 | 605 | Gene3D | - | 162 | 300 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Hepe09g1085 | 605 | Gene3D | - | 76 | 153 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Hepe09g1085 | 605 | Pfam | Ethylene insensitive 3, DNA-binding domain | 42 | 289 | IPR047091 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe09g1037 | Hepe-Chr9:10749433 | Hepe09g1085 | Hepe-Chr9:12071998 | 9.23e-113 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56395 | PF04873 | EIN3 | 1.60E-127 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g1085 | K14514 | - | csv:101210347 | 1047.34 |