Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1143 ATGTTTCAAGACGAAGGCACATCCTCCATAACTTCCTCTCCTCTTCAGTTCTTCACAATGATGTCCCTTTCACCTAAATTGGGTTCTCCATATCCATGGCTTAGAGAGCTCAAATCTGAGGAGAGGGGCTTGTATTTAATCCATTTGTTGCTTACTTGTGCAAATCATGTGGCTGTTGGTAGCCTTGACAGTGCTAATATTGCCCTTGATCAAATATCCCATCTTGCTTCTGCTGATGGTGATACAATGCAGCGGATTGCGGCGTATTTCGCCGAGGCTCTCGCGGATCGAATCCTTAAAACTTGGCCTGGTCTTTACAAGGCCTTCAACTCCACTAAGATACCAATGGTTTCAGAGGAGATTCTTGTTAAGAAACTGTTCTTTGAGATGTTTCCATTCCTCAAGGTGGCTTTTGTGCTTACTAATCAGGCTATTGTTGAAGCCATGGAGGGGGAAAAGATGATTCATATTGTTGATCTCAATGCCAATGAAACTGCCCAGTGGCTTGCACTTTTGCAAGTTTTGAGTGCCAGACCTGAAGGACCTCCCCATTTGAGAATCACTGGAGTTCATCCAAAGAAAGAGGTTCTGGATCAAATGGCTCGTAGGCTGACCGAAGAAGCCGAAAAAATGGATATCTCGTTTCAGTTCAACTCGGTTATCAGCCGATTAGAGGATCTTGATATGGAAAAGCTTCGTGTGAAAACCGGGGAGGCTCTGGCTATCAACTCAGTTCTTCAGTTGCACACCCTTTTGGGCTCTGATAAAGAAGTCCTGCAAAAGCCATCTCCATCGGCATCAAAAAGTGCTGAAAATGGAGTTCAATACTCGAGATACCCGCACCTGAACCAAACCACCTTGAGCGAGTTACTCGACAAGGATTTGGTTAATGGTTGCAGTCCAAGCCCCGACTCGGTTTCATCGTCAGCACTATCTCAAGCTAGTGCAACGAAGATCGAGAGCTTTTTGAATGGATTGTGGAGTTTAACGCCGAAGGTGGTGGTCGTAACCGAACAAGATTCTAACCATAATGGTTCATCACTTATGGAGAGATTACTAGAGGCTCTACACACATATGCAGCTGTTTTTGATTGTTTGGAATCTAACATGTCAAGAACATCCCTGGAGAGGTTGAAGTTGGAAAAGATGCTATTTGGGGAAGAGATTAAGAACATTATAGCTTGTGAGGGAGCTGAGAGGAAGGAACGACACGAAAAGCGTGAGAAATGGAGTCAACGGTTCGATCTCGCGGGGTTCAGGCATGTGTCTTTGAGTTATTATGGCATGCTGCAGGCGCAGAGCCTGCTGCAGGGGTATGGTTGTGATGGTTATAGGATGAAGGAAGAGAAGGGTTGTGTGATGATTTGTTGGCAGGATCGTCCGTTGTTCTCGGTATCTGCTTGGAGGTGTTGTAAGTAG 1419 45.31 MFQDEGTSSITSSPLQFFTMMSLSPKLGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLDSANIALDQISHLASADGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKIPMVSEEILVKKLFFEMFPFLKVAFVLTNQAIVEAMEGEKMIHIVDLNANETAQWLALLQVLSARPEGPPHLRITGVHPKKEVLDQMARRLTEEAEKMDISFQFNSVISRLEDLDMEKLRVKTGEALAINSVLQLHTLLGSDKEVLQKPSPSASKSAENGVQYSRYPHLNQTTLSELLDKDLVNGCSPSPDSVSSSALSQASATKIESFLNGLWSLTPKVVVVTEQDSNHNGSSLMERLLEALHTYAAVFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKREKWSQRFDLAGFRHVSLSYYGMLQAQSLLQGYGCDGYRMKEEKGCVMICWQDRPLFSVSAWRCCK 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13336648 13338936 - Hsped.09g11430.1 Hepe09g1143 579827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1143 472 ProSiteProfiles GRAS family profile. 37 469 IPR005202 -
Hepe09g1143 472 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 468 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009739(PANTHER)|GO:0043565(PANTHER)
Hepe09g1143 472 Pfam GRAS domain family 46 469 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1006 Hepe-Chr1:74696412 Hepe09g1143 Hepe-Chr9:13336648 1.83e-206 dispersed
Hepe04g1315 Hepe-Chr4:68769049 Hepe09g1143 Hepe-Chr9:13336648 8.29e-38 dispersed
Hepe09g0722 Hepe-Chr9:6884803 Hepe09g1143 Hepe-Chr9:13336648 5.72e-62 dispersed
Hepe09g1143 Hepe-Chr9:13336648 Hepe10g1414 Hepe-Chr10:50776035 8.27e-27 dispersed
Hepe09g1143 Hepe-Chr9:13336648 Hepe08g0397 Hepe-Chr8:3565298 2.03e-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56399 PF03514 GRAS 1.70E-141 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1143 - - - 0.0