Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1201 ATGGCCACTCAGGCACTTGTCTCATCTTCCTTAACCTCTTCAGTGGGTGCAGCCAGACAGAGATTAGGGTCAACAAAACCCTCCAGGAAACCTGCTTCTTCTTTTGTTGTCAGAGCTAGTGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGACAACTATGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTCCCGGGCGATTTCGGATTCGATCCATTGGGGCTATCGGACCCCGAGGGCACGGGAGGGTTCATCGAGCCGAAATGGTTGGCATACGGCGAGGTGATCAACGGTAGGTTCGCCATGTTGGGAGCAGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAGCTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGGTTTGCAGAACACAGAAGATTTCAAGATTGGTACAATCCAGGGTCCATGGGGAAACAATACTTTTTAGGCCTAGAGAAGTTTTTGGCTGGGTCAGGAGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGAAAAGATGAGAAGTCATTGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCTATCTTGGGTTACTTTATACAAGGTCTTGTGACTGGTGTTGGACCTTACCAAAACCTTGTGGACCATTTGTCTGACCCTGTCAACAACAACATTTTGACCAGCCTTAAATTCCACTAG 816 49.26 MATQALVSSSLTSSVGAARQRLGSTKPSRKPASSFVVRASATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYSYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLAGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLVDHLSDPVNNNILTSLKFH 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14807166 14809168 - Hsped.09g12010.1 Hepe09g1201 579885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1201 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 266 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Hepe09g1201 271 MobiDBLite consensus disorder prediction 1 37 - -
Hepe09g1201 271 MobiDBLite consensus disorder prediction 1 31 - -
Hepe09g1201 271 FunFam Chlorophyll a-b binding protein, chloroplastic 52 270 - -
Hepe09g1201 271 Pfam Chlorophyll A-B binding protein 62 241 IPR022796 -
Hepe09g1201 271 SUPERFAMILY Chlorophyll a-b binding protein 50 267 - -
Hepe09g1201 271 Gene3D Chlorophyll a/b binding protein domain 52 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1783 Hepe-Chr7:60407578 Hepe09g1201 Hepe-Chr9:14807166 1.23e-35 dispersed
Hepe07g1785 Hepe-Chr7:60430990 Hepe09g1201 Hepe-Chr9:14807166 1.61e-36 dispersed
Hepe09g0112 Hepe-Chr9:895168 Hepe09g1201 Hepe-Chr9:14807166 1.26e-49 dispersed
Hepe09g1201 Hepe-Chr9:14807166 Hepe10g1514 Hepe-Chr10:51884660 3.22e-48 dispersed
Hepe09g1201 Hepe-Chr9:14807166 Hepe07g2501 Hepe-Chr7:69346219 8.11e-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1201 K08909 - csv:101202993 498.049