Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1273 ATGGGGTCCTGCTTATCTGTAGAAAGTAAGAGGGGGGTTATTCCTGGTTTCCCTGTATCTCCTGTGCTTGGAGGAAGGAAACAGAAAGACTCAGACAATGGGCTCAAGTCTAAGAATTATGTGTTTGAGCAGGAGAGTGAAGCAACAGTACACAGAATTCCTGGTAGAATGTTCTTAAATGGATCGAGTGAAGTCGCCTCGCTTTATACTCAACAGGGCAAGAAAGGGACGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTCTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCTCAAAAAGAGTGAGGGATTCTCTTCCCTTGAAACTGACTGCACATTGGGAAGCTAATGAGGATATTTCGAAAGAGTTCGGTTGTAAAACAGAAGGTGTGACCAATGAAGATTCTGCTTTAGAAACTGCTTGGAAGGAAGCTAGTTCCCCCCTTACACACCCTGAAATTTCTGAAAAACTGAAGGAATCATTTCTGAAGGCTTTTAAGATAATGGATGGGGAACTCAAAATGCAACCAAGTATTGATTGCTTCTGTAGTGGAACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGGGACTCTCGGGCTGTGCTGGGTACCAGAGATAAGGATAATTCTCTCCAAGCTGTTCAGTTGACCATAGATCTCAAGCCAGATATTCCAGCGGAAGCGGAGAGAATTCTCAAATGCAAAGGCCGCGTATTTGCTCATCAGAACGAACCAGAAGTGGCTAGAGTTTGGCTTCCAAACAATGATTCCCCCGGGCTAGCGATGGCTCGATCTTTCGGAGACTTTTGCCTCAAGGATTTCGGTCTAATTTCTGTTCCTGAAATATCATATCGGTTTCTGACAGACAAGGATGAATTTATAGTTTTAGCTACAGACGGAATTTGGGATGTTCTCTCAAACAAAGAGGTAGTTGACATTGTAGCATCGGCCCCAGCTCGTTCTGCAGCCCGATCATTGGTCGAGTCTGCGACTAAAGCATGGAGATCCAAGTTTCCTTTTTCCAACGTTGACGACTGCGCTGTTGTGTGCCTCTTCCTTGACTCGAACTTGAACGTTATGGTGTCTGAGACAGCCATGGTGGATGATGATGTCTCAGGAGCAGCTGGTCTACGGCGTTCAGAAATCGTGCAAACAGTCGGAGTTTCTCGGAGAAGCGGACGATAG 1245 45.46 MGSCLSVESKRGVIPGFPVSPVLGGRKQKDSDNGLKSKNYVFEQESEATVHRIPGRMFLNGSSEVASLYTQQGKKGTNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVSKRVRDSLPLKLTAHWEANEDISKEFGCKTEGVTNEDSALETAWKEASSPLTHPEISEKLKESFLKAFKIMDGELKMQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDKDNSLQAVQLTIDLKPDIPAEAERILKCKGRVFAHQNEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLTDKDEFIVLATDGIWDVLSNKEVVDIVASAPARSAARSLVESATKAWRSKFPFSNVDDCAVVCLFLDSNLNVMVSETAMVDDDVSGAAGLRRSEIVQTVGVSRRSGR 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17359646 17363373 + Hsped.09g12730.1 Hepe09g1273 579957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1273 414 CDD PP2Cc 65 373 IPR001932 -
Hepe09g1273 414 ProSiteProfiles PPM-type phosphatase domain profile. 65 373 IPR001932 -
Hepe09g1273 414 PANTHER PROTEIN PHOSPHATASE 54 372 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe09g1273 414 SUPERFAMILY PP2C-like 63 374 IPR036457 -
Hepe09g1273 414 SMART PP2C_4 57 371 IPR001932 -
Hepe09g1273 414 Gene3D - 60 378 IPR036457 -
Hepe09g1273 414 Pfam Protein phosphatase 2C 155 339 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1222 Hepe-Chr6:61844327 Hepe09g1273 Hepe-Chr9:17359646 1.56e-142 dispersed
Hepe08g2285 Hepe-Chr8:62599518 Hepe09g1273 Hepe-Chr9:17359646 6.34e-105 dispersed
Hepe09g1273 Hepe-Chr9:17359646 Hepe10g0050 Hepe-Chr10:463067 1.05e-13 dispersed
Hepe08g1888 Hepe-Chr8:48728316 Hepe09g1273 Hepe-Chr9:17359646 2.33e-175 wgd
Hepe08g1407 Hepe-Chr8:16615057 Hepe09g1273 Hepe-Chr9:17359646 2.96e-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1273 - - - 0.0