Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g1303 | ATGAAGGGCGAGTTCCCAGAAAGAATTGGACAGCCAGAATGTCAGTACTACTTGAAGACAGGAACTTGCAAGTTTGGGGCTACGTGCAAGTTTCATCACCCTAGAGACAAAGCTGGCATTGCTGGAAGAGTTGCCTTAAATATTTTAGGCTATCCACTCCGCCCGAGTGAAACTGAATGTGCTTATTATTTAAGAACTGGACAATGCAAGTTTGGAAATACATGTAAATTCCACCATCCTCAACCGACTAATATGATGGTCTCACTGCGCGGTTCTCCTATTTATCCAACCGTACAATCACCAACTCCTGGTCAGCAGTCATATCCAGGAGGAAGCACAAATTGGTCAAGGGCTTCATTTATTCCCAGTCCACGATGGCAAGGCCCTTCGAGTTATGCATCTTTAATTTTACCTCAGGGAGTTCTTTCTGTTCCAGGTTGGAATGCATTCAATGATCAGCTAGGATCAGTTTCATCTTCAGAAAGTCCACAACAAACGAGGGAGAATGTATTTCCTGAGAGGCCTGGCCAGCCTGAATGTCAATTTTACATGAAGACTGGAGATTGCAAGTTTGGTGCCGTTTGTCGGTTTCATCATCCCAGGGAAAGAATACTTCCTGCTCCAGATTGTGTCTTGAGTCCAATAGGCCTGCCATTACGTCCGGGAGAACCTTTGTGCATCTTTTATTCTCGTTATGGGATCTGTAAGTTCGGTCCAAGCTGCAAGTTTGATCACCCTATGGGAATCTTCACATACAATCTCTCCGCAGCGTCATCAGCCAATGCCCCGGTTCAGCATTTGTTCGGGACGTCTTCAGGAACAACTGCACTGAACTTGTCATCTGAAGGGCTAGTTGTTGAAGCAGGATCTGCAAAGCCGAGGCGACTATCGCTCTCGGAGACTCGAGAGATGCCATCTGACGATGAAAATATCGACGCTGAGGGCTGA | 948 | 46.31 | MKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYASLILPQGVLSVPGWNAFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERILPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFTYNLSAASSANAPVQHLFGTSSGTTALNLSSEGLVVEAGSAKPRRLSLSETREMPSDDENIDAEG | 315 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 18823483 | 18841827 | - | Hsped.09g13030.1 | Hepe09g1303 | 579987 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g1303 | 315 | Gene3D | - | 8 | 91 | - | - | |
| Hepe09g1303 | 315 | SMART | c3hfinal6 | 174 | 201 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | SMART | c3hfinal6 | 54 | 81 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | SMART | c3hfinal6 | 8 | 35 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | SMART | c3hfinal6 | 220 | 247 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 57 | 81 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 221 | 247 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 175 | 201 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 11 | 35 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | ProSiteProfiles | Zinc finger C3H1-type profile. | 8 | 36 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | SUPERFAMILY | CCCH zinc finger | 223 | 247 | IPR036855 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | ProSiteProfiles | Zinc finger C3H1-type profile. | 174 | 202 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | SUPERFAMILY | CCCH zinc finger | 12 | 37 | IPR036855 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | PANTHER | PROTEIN PHOSPHATASE RELATED | 5 | 248 | IPR050974 | GO:0003729(PANTHER) | |
| Hepe09g1303 | 315 | MobiDBLite | consensus disorder prediction | 290 | 315 | - | - | |
| Hepe09g1303 | 315 | Gene3D | - | 163 | 249 | - | - | |
| Hepe09g1303 | 315 | SUPERFAMILY | CCCH zinc finger | 178 | 203 | IPR036855 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | FunFam | CCCH type zinc finger protein | 172 | 257 | - | - | |
| Hepe09g1303 | 315 | MobiDBLite | consensus disorder prediction | 155 | 174 | - | - | |
| Hepe09g1303 | 315 | ProSiteProfiles | Zinc finger C3H1-type profile. | 220 | 248 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | ProSiteProfiles | Zinc finger C3H1-type profile. | 54 | 82 | IPR000571 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | SUPERFAMILY | CCCH zinc finger | 56 | 82 | IPR036855 | GO:0046872(InterPro) | |
| Hepe09g1303 | 315 | MobiDBLite | consensus disorder prediction | 155 | 171 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g0005 | Hepe-Chr2:129552 | Hepe09g1303 | Hepe-Chr9:18823483 | 7.34e-14 | dispersed | |
| Hepe05g1466 | Hepe-Chr5:64057579 | Hepe09g1303 | Hepe-Chr9:18823483 | 1.61e-17 | dispersed | |
| Hepe07g2163 | Hepe-Chr7:65864008 | Hepe09g1303 | Hepe-Chr9:18823483 | 1.11e-22 | dispersed | |
| Hepe08g0589 | Hepe-Chr8:5176017 | Hepe09g1303 | Hepe-Chr9:18823483 | 1.24e-28 | dispersed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 56404 | PF00642 | zf-CCCH | 2.00E-10 | CL0537 | Hepe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g1303 | - | - | - | 0.0 |