Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g1511 | ATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATCATGGCGGTGCCGCCAGCTTATGGCGGCGGAGGGGATGTGGTGTCTATGCCTATGGGGTTGCAACTTGGATCCTCCGGCGGCGGCGACGGTGGGCTGAGAGGAATGGGTTTGCAAGGCGGAATGGCTATGCCTTTGGGGCTGAATTTAGAACAAGGGTTTTTGAGACAAGATAGGTTTAGAGATGAGTTTGATGCCCATAATAATAATACCACTAATAATGCTTCTTCTTCTTCAACTGCTTCTTCAGGAATCACTGAGAGAGATTCTTCGGTGCAGCACATGACCAGCTTGTTTCCGACCTTTGGACATTTGCAGACTCAACCACTACGGCCCCCGCCGCCGTTACATCTCCACCAGCCCTTTCACAATCAAACAAATCACGGGACGATTGCTGCCGTACCGCAACCGCCTCAAATCCGTCCAAGAGTTCGAGCAAGACGTGGGCAAGCGACCGATCCTCACAGCATTGCAGAAAGGTTGCGTCGAGAAAGAATTGCAGAACGAATGAAGGCCTTGCAAGAGTTGGTTCCTAGTTGCAATAAGACTGATAGGGCGGCAATGCTTGATGAAATTGTGGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTGAGCATGAGTAGGCTAGGCGGGGCAGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCCTATCATCAGTCGAGGGGGAAGGAATTGAGATTGGCAACAATCAGCAAGCATGGGAAAAGTGGTCAAGTGATGGCACAGAGCAACAGGTAGCCAAATTGATGGAAGAAGATGTGGGAGCTGCGTTGCAATTCCTACAATCTAAAGCTCTATGCATCATGCCCATCTCATTAGCCTCGGCAATTTTCAGGACACACCAATCTGATCCACAAATCATGGTGAAGCCAGAAATGAACACTCCCTAG | 966 | 49.9 | MAGIPSEGLGDDFFEQIMAVPPAYGGGGDVVSMPMGLQLGSSGGGDGGLRGMGLQGGMAMPLGLNLEQGFLRQDRFRDEFDAHNNNTTNNASSSSTASSGITERDSSVQHMTSLFPTFGHLQTQPLRPPPPLHLHQPFHNQTNHGTIAAVPQPPQIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIEIGNNQQAWEKWSSDGTEQQVAKLMEEDVGAALQFLQSKALCIMPISLASAIFRTHQSDPQIMVKPEMNTP | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 38643167 | 38655125 | + | Hsped.09g15110.1 | Hepe09g1511 | 580195 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g1511 | 321 | SMART | finulus | 172 | 221 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g1511 | 321 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 164 | 225 | IPR036638 | GO:0046983(InterPro) | |
Hepe09g1511 | 321 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 166 | 215 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g1511 | 321 | MobiDBLite | consensus disorder prediction | 81 | 106 | - | - | |
Hepe09g1511 | 321 | FunFam | Basic helix-loop-helix transcription factor | 161 | 223 | - | - | |
Hepe09g1511 | 321 | Gene3D | - | 159 | 216 | IPR036638 | GO:0046983(InterPro) | |
Hepe09g1511 | 321 | MobiDBLite | consensus disorder prediction | 119 | 154 | - | - | |
Hepe09g1511 | 321 | MobiDBLite | consensus disorder prediction | 83 | 106 | - | - | |
Hepe09g1511 | 321 | Pfam | Helix-loop-helix DNA-binding domain | 171 | 216 | IPR011598 | GO:0046983(InterPro) | |
Hepe09g1511 | 321 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 62 | 300 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g2459 | Hepe-Chr8:65616674 | Hepe09g1511 | Hepe-Chr9:38643167 | 1.55e-49 | dispersed | |
Hepe09g0590 | Hepe-Chr9:5547958 | Hepe09g1511 | Hepe-Chr9:38643167 | 3.57e-56 | dispersed | |
Hepe09g1511 | Hepe-Chr9:38643167 | Hepe10g1832 | Hepe-Chr10:55051312 | 1.00e-17 | dispersed | |
Hepe03g2043 | Hepe-Chr3:77926067 | Hepe09g1511 | Hepe-Chr9:38643167 | 1.71e-90 | transposed | |
Hepe06g2003 | Hepe-Chr6:71173190 | Hepe09g1511 | Hepe-Chr9:38643167 | 3.11e-15 | transposed | |
Hepe03g0654 | Hepe-Chr3:14280768 | Hepe09g1511 | Hepe-Chr9:38643167 | 4.63e-10 | wgd | |
Hepe05g1139 | Hepe-Chr5:56379059 | Hepe09g1511 | Hepe-Chr9:38643167 | 1.95e-07 | wgd | |
Hepe05g0900 | Hepe-Chr5:34467782 | Hepe09g1511 | Hepe-Chr9:38643167 | 1.46e-10 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56410 | PF00010 | HLH | 7.10E-08 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g1511 | - | - | - | 0.0 |