Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1511 ATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATCATGGCGGTGCCGCCAGCTTATGGCGGCGGAGGGGATGTGGTGTCTATGCCTATGGGGTTGCAACTTGGATCCTCCGGCGGCGGCGACGGTGGGCTGAGAGGAATGGGTTTGCAAGGCGGAATGGCTATGCCTTTGGGGCTGAATTTAGAACAAGGGTTTTTGAGACAAGATAGGTTTAGAGATGAGTTTGATGCCCATAATAATAATACCACTAATAATGCTTCTTCTTCTTCAACTGCTTCTTCAGGAATCACTGAGAGAGATTCTTCGGTGCAGCACATGACCAGCTTGTTTCCGACCTTTGGACATTTGCAGACTCAACCACTACGGCCCCCGCCGCCGTTACATCTCCACCAGCCCTTTCACAATCAAACAAATCACGGGACGATTGCTGCCGTACCGCAACCGCCTCAAATCCGTCCAAGAGTTCGAGCAAGACGTGGGCAAGCGACCGATCCTCACAGCATTGCAGAAAGGTTGCGTCGAGAAAGAATTGCAGAACGAATGAAGGCCTTGCAAGAGTTGGTTCCTAGTTGCAATAAGACTGATAGGGCGGCAATGCTTGATGAAATTGTGGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTGAGCATGAGTAGGCTAGGCGGGGCAGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCCTATCATCAGTCGAGGGGGAAGGAATTGAGATTGGCAACAATCAGCAAGCATGGGAAAAGTGGTCAAGTGATGGCACAGAGCAACAGGTAGCCAAATTGATGGAAGAAGATGTGGGAGCTGCGTTGCAATTCCTACAATCTAAAGCTCTATGCATCATGCCCATCTCATTAGCCTCGGCAATTTTCAGGACACACCAATCTGATCCACAAATCATGGTGAAGCCAGAAATGAACACTCCCTAG 966 49.9 MAGIPSEGLGDDFFEQIMAVPPAYGGGGDVVSMPMGLQLGSSGGGDGGLRGMGLQGGMAMPLGLNLEQGFLRQDRFRDEFDAHNNNTTNNASSSSTASSGITERDSSVQHMTSLFPTFGHLQTQPLRPPPPLHLHQPFHNQTNHGTIAAVPQPPQIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIEIGNNQQAWEKWSSDGTEQQVAKLMEEDVGAALQFLQSKALCIMPISLASAIFRTHQSDPQIMVKPEMNTP 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38643167 38655125 + Hsped.09g15110.1 Hepe09g1511 580195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1511 321 SMART finulus 172 221 IPR011598 GO:0046983(InterPro)
Hepe09g1511 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 225 IPR036638 GO:0046983(InterPro)
Hepe09g1511 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983(InterPro)
Hepe09g1511 321 MobiDBLite consensus disorder prediction 81 106 - -
Hepe09g1511 321 FunFam Basic helix-loop-helix transcription factor 161 223 - -
Hepe09g1511 321 Gene3D - 159 216 IPR036638 GO:0046983(InterPro)
Hepe09g1511 321 MobiDBLite consensus disorder prediction 119 154 - -
Hepe09g1511 321 MobiDBLite consensus disorder prediction 83 106 - -
Hepe09g1511 321 Pfam Helix-loop-helix DNA-binding domain 171 216 IPR011598 GO:0046983(InterPro)
Hepe09g1511 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 62 300 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2459 Hepe-Chr8:65616674 Hepe09g1511 Hepe-Chr9:38643167 1.55e-49 dispersed
Hepe09g0590 Hepe-Chr9:5547958 Hepe09g1511 Hepe-Chr9:38643167 3.57e-56 dispersed
Hepe09g1511 Hepe-Chr9:38643167 Hepe10g1832 Hepe-Chr10:55051312 1.00e-17 dispersed
Hepe03g2043 Hepe-Chr3:77926067 Hepe09g1511 Hepe-Chr9:38643167 1.71e-90 transposed
Hepe06g2003 Hepe-Chr6:71173190 Hepe09g1511 Hepe-Chr9:38643167 3.11e-15 transposed
Hepe03g0654 Hepe-Chr3:14280768 Hepe09g1511 Hepe-Chr9:38643167 4.63e-10 wgd
Hepe05g1139 Hepe-Chr5:56379059 Hepe09g1511 Hepe-Chr9:38643167 1.95e-07 wgd
Hepe05g0900 Hepe-Chr5:34467782 Hepe09g1511 Hepe-Chr9:38643167 1.46e-10 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56410 PF00010 HLH 7.10E-08 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1511 - - - 0.0