Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1569 ATGAAACACATTTTCAAGAAGTTTCACATAGGAAGCAATAATCACGACCCGAATCGCTCCAACGACAATCCCTCGCCTGTACCAGCGTCCTCCTCACCATCACCATCACCATCACCATGTGTTTCTGATAATCGTCCTGCAACTGCAACTGCTCCTGCTCCTGCTCCTGCTCCTGCCCAGACTTCCACCAACTCTCCGTCGAGTCCTTCGTCGCTGGCAACAACTCCTCCAGTTCCAGGCGCCGGAACCGTCACTTCGCTTTCGGTGCCTCCCAATCGCTCGGATTACTTTTCTTCCGAGGAGGAGTTTCAGGTTCAGCTTGCCCTAGCTATTAGCGCCTCCAATTCTGACTTCCGGGATGATCCGGAGAAGGACCAAATTCGAGCTGCCACGCTTTTGAGCTTGGGAAATCATCGGATTGATTCCACTGCCAGGGACCATGAAGATGCTGCCGAAGCGCTCTCGAGGCAATATTGGGAATACAATCTGCTCGACTATGAAGAAAAAGTGGTCAATGGATTTTATGATGTCCTCTCTACGGATTCAGCAGTCCAAGGAAAAATTCCATCTCTATCTGATATTGAGGCAAGCTTTGGTAGTTCTGGCTTTGAAGTCGTGATGGTCAATATGACTGTTGATCATACACTAGAGGAGCTAGTGCAAATTGCTCAATGTATTGCAGATTGCCCTGGCACTGAGGTCAGAATTTTGGTTCAGAGGCTTGCCGAGCTCGTTATGGGACACATGGGTGGACCTGTAAAGGACGCCAATTTTATGCTAGCACGGTGGATGGAAAGAAGTACAGAGTTAAGGACTTCTCTTCACACCAGTGTATTGCCTATTGGTTCCATTAATATTGGCCTCTCAAGACATCGTGCATTGCTTTTCAAGGTATTAGCTGACAATATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACTGGTGTTGAAGAAGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACACTTATACCAGCAGACATATTAAGTGCAAAGGACACTTCTACCTTTAAGCCTTACAATCCTAAAGTAAACAAAATTCCTTCTCTCCACTACTCCAATGATGTTGGAATTTCTTCCGCGAAACCAACATCATCACTTGAGGAAGGCAGCAGTCAAAACTTTGAAGCAGAGGCCAGCTTACTGGTGGATGGGAAACTGAGGTATGGAAGGACAGAGTCTGTACCGTCAAGCTCAGGTACTGAGACCTCTCGATACAAAGGGGCCCATTCAGGTGATAGTAATGTTAGACTGAATGTCAATGCAGTTCCATTTGGTCAAAGCTCCGAGGATCCCAAAAATCTTTTTGCAGATCTTAACCCTTTCCAAATAAAAGGAACTGGAAAAAGTTTCATTCTTAACAAATCCTCCGATAATAAAATTGAGGAGCTTCAGAATCCTACTGTTGGGCATCCTCCTGTACCGTTGTGGAAAAATCGGGTTGCTTTCAATGCAGTTCCCAAGAAAAAAGAGTATGATTATATGGAGGGCCGTTTTCCAAGAATTAGTCGTGGATCTTATGATCATAATATGGCATTGTCTTCTTCTGCCAACTCTACTGTAAATGTCAAACCTGGTGGTTCAGCAATATCCACCGACTCGAGTGTATCAGTTAGAAGTGCTGAAGTTGGAAGTTCTTCATCTAATATGAACTCGCGGTCGACATTTGCCACGATTGAGCCTAATATTTGGCCTTTGATTGATGAACAAAACGGAAATCCCTATGGAGATATAGACATGCAAGACGAAACGGTCGATGCTGTTGATAGACGCGATCATTTAACCAGATTTGATAACCGTAGAAACTTCACATATGACAGATCTGTTGGGACCAACTTGATATTGAAGGATCCGGGAAGTCCCAGCCTGTTGATTGATCCAAGTTCAACTAGGTTTGAGCAAGTTTATGATGATGTGGATGTAGGCCAATGTGAAATCCAATGGGAGGACCTCATTATTGGTGAAAGGATTGGACTAGGTTCATATGGAGAAGTCTACCATGCTGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTCTTAGACCAGGATTTTTCTGGTGCTGCTTTAGCTGAGTTCAAAAGAGAAGTACTGATAATGCGGCAGCTACGTCATCCAAACATAGTTCTTTTTATGGGTGCTGTCACTCGTCCTCCTAACCTTTCCATTGTTACTGAGTTTCTTCCAAGAGGAAGCTTGTACCGGATCATTCACCGCCCACATTGTCAAATTGATGAAAAGCGCAGAATAAAAATGGCCCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGTAATCCAACAATTGTTCACCGAGATCTGAAGTCACCGAATCTTTTGGTTGATAAGAACTGGAATGTGAAGGTATCAGATTTTGGGTTGTCACGCCTGAAGCACAACACATTTTTGTCATCTAAATCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAAGTTCTCCGGAATGAGCCTTCAAATGAGAAGTGCGATGTTTATAGCTTCGGAATCATTCTATGGGAACTTGCTACATTGAGGCTGCCTTGGAGTGGGATGAATCCCATGCAAGTTGTTGGTGCAGTAGGTTTCCAGAATCGACGCCTCGAAATACCCAAGGAAGTAGATCCCACGGTTGCAAGGATAATCTGGGAATGCTGGCAAACCGATCCGAACTTGCGACCCTCATTTGCACAACTAGCCAATATTCTGAAGCCACTTCAGCAGCTCGTCCTGCCACCACATTCGGACCAGCCGAGTTCATCGGTGCTACAAGAGATTTCTGTAAATTCTACACCTTGA 2865 44.82 MKHIFKKFHIGSNNHDPNRSNDNPSPVPASSSPSPSPSPCVSDNRPATATAPAPAPAPAQTSTNSPSSPSSLATTPPVPGAGTVTSLSVPPNRSDYFSSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGNHRIDSTARDHEDAAEALSRQYWEYNLLDYEEKVVNGFYDVLSTDSAVQGKIPSLSDIEASFGSSGFEVVMVNMTVDHTLEELVQIAQCIADCPGTEVRILVQRLAELVMGHMGGPVKDANFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEEDAVNIIKLEDEREFLVDLMAAPGTLIPADILSAKDTSTFKPYNPKVNKIPSLHYSNDVGISSAKPTSSLEEGSSQNFEAEASLLVDGKLRYGRTESVPSSSGTETSRYKGAHSGDSNVRLNVNAVPFGQSSEDPKNLFADLNPFQIKGTGKSFILNKSSDNKIEELQNPTVGHPPVPLWKNRVAFNAVPKKKEYDYMEGRFPRISRGSYDHNMALSSSANSTVNVKPGGSAISTDSSVSVRSAEVGSSSSNMNSRSTFATIEPNIWPLIDEQNGNPYGDIDMQDETVDAVDRRDHLTRFDNRRNFTYDRSVGTNLILKDPGSPSLLIDPSSTRFEQVYDDVDVGQCEIQWEDLIIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNIVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPHCQIDEKRRIKMALDVARGMNCLHTSNPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPTVARIIWECWQTDPNLRPSFAQLANILKPLQQLVLPPHSDQPSSSVLQEISVNSTP 954
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42598454 42615217 + Hsped.09g15690.1 Hepe09g1569 580253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1569 954 MobiDBLite consensus disorder prediction 414 435 - -
Hepe09g1569 954 Gene3D Transferase(Phosphotransferase) domain 1 752 933 - -
Hepe09g1569 954 MobiDBLite consensus disorder prediction 413 435 - -
Hepe09g1569 954 CDD STKc_MAP3K-like 679 925 - -
Hepe09g1569 954 PRINTS Tyrosine kinase catalytic domain signature 896 918 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 PRINTS Tyrosine kinase catalytic domain signature 786 804 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 PRINTS Tyrosine kinase catalytic domain signature 833 843 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 PRINTS Tyrosine kinase catalytic domain signature 747 760 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 PRINTS Tyrosine kinase catalytic domain signature 852 874 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 SUPERFAMILY Protein kinase-like (PK-like) 664 942 IPR011009 -
Hepe09g1569 954 PANTHER SERINE-THREONINE PROTEIN KINASE 30 926 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe09g1569 954 MobiDBLite consensus disorder prediction 55 87 - -
Hepe09g1569 954 ProSiteProfiles Protein kinase domain profile. 673 932 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 Gene3D Phosphorylase Kinase; domain 1 666 750 - -
Hepe09g1569 954 FunFam PAS domain-containing protein tyrosine kinase family protein 751 938 - -
Hepe09g1569 954 FunFam Serine/threonine-protein kinase isoform 1 664 751 - -
Hepe09g1569 954 Pfam Ethylene-responsive protein kinase Le-CTR1 151 346 - -
Hepe09g1569 954 Pfam Protein tyrosine and serine/threonine kinase 675 924 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 MobiDBLite consensus disorder prediction 1 87 - -
Hepe09g1569 954 SMART serkin_6 673 928 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g1569 954 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1877 Hepe-Chr1:83658959 Hepe09g1569 Hepe-Chr9:42598454 4.72e-216 dispersed
Hepe05g0338 Hepe-Chr5:4127975 Hepe09g1569 Hepe-Chr9:42598454 5.83e-143 dispersed
Hepe07g2360 Hepe-Chr7:67958237 Hepe09g1569 Hepe-Chr9:42598454 2.74e-199 dispersed
Hepe08g0564 Hepe-Chr8:4931037 Hepe09g1569 Hepe-Chr9:42598454 1.31e-74 dispersed
Hepe09g0616 Hepe-Chr9:5753608 Hepe09g1569 Hepe-Chr9:42598454 1.96e-50 dispersed
Hepe09g1569 Hepe-Chr9:42598454 Hepe10g0230 Hepe-Chr10:2432494 2.67e-33 dispersed
Hepe03g0044 Hepe-Chr3:512662 Hepe09g1569 Hepe-Chr9:42598454 2.16e-107 transposed
Hepe02g1834 Hepe-Chr2:28060911 Hepe09g1569 Hepe-Chr9:42598454 3.11e-44 wgd
Hepe05g0997 Hepe-Chr5:45839823 Hepe09g1569 Hepe-Chr9:42598454 3.41e-29 wgd
Hepe06g0891 Hepe-Chr6:56192594 Hepe09g1569 Hepe-Chr9:42598454 7.89e-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73151 PF07714 PK_Tyr_Ser-Thr 6.10E-63 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1569 - - - 0.0