Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1571 ATGGATTTTAGGGTTTCAATTTGGATAGTGGTCGTGGTGTGGTTATTGGGATTGGGATGGAGAGTTTTGAATTTTATTTGGTTGAGGCCGAAGAAGCTTGAGAAGTGCCTTAGAGAGCAAGGACTCGCCGGGAATCCTTACCGTCTTTACTCCGGCGACTTGAAGGACAGAGCCGCCATGATGCTGCAGGCCAATTCCAAACCCATGAACTTCTCCCATGATATTGCTCCACGTGTCATCCCCTCCATACATCATACCATTCAGAAATATGGGAAGAATTCATTCATGTGGTTTGGACCATATCCAAGAGTGCACATCATGGACCCTGAACAAGTGAAAGCTGCTTTTTCTCTAATCAATGATATTCAGAAGCCAACTTTAGACCCTCTTGCCAAGATGCTTTTTGATGGACTTAGTAGTCATGAAGGACCAAAATGGGTTAAACATAGAAAGATAATCAACCCTGCATTTCATTTTGAAAAGTTGAAGGACATGGTGCCAACAATGTTTGAGAGTTGCAATGAGATGCTTATCAATTGGGAAAGAATGATCTCAAAAGATGGATTTTGTGAATTGGATGTGATGCCTCATTTGCAAAATTTTGCGGCTGATGTCATTTCTCGAACAGCATTTGGAAGTACTTACGAACAAGGAAAAATTATCTTCAAGGATCTACAAGAATTGACTAATTTGATATTGAAAGTTACATCCCAAGTTTACATACCAGGATGGAGGTTTCTACCAACAAAGTCAAACAATAGAATCAAAAAGTTGAGTAAAGAAATAAAAACTTTGCTCTTGAGTCTTATCAACGATAGGCAAAGGGCTATGAACGCAGGTGAAACTATACATACTGATCTATTAAGCATTCTCATAGAATCAAATTTCAACGAAATTCGAGAAAATGGAAACAACAACAATATTGGAATGAGCATAGAAGACATGGTCAAAGAATGCAAGATTTTCTATCTTGCTGGTCAAGAAACCACAGCGGTGTTGCTAGTTTGGACGATGATTTTGTTGAGCTCATATTCAAAATGGCAAGATCGGGCAAGAGCAGAGGTCCTAGAAGTCTTTGGTAACAACAAACCAGATTTTGATGGTTTAAATCGCCTAAAAATTGTTACTATGATTCTGAACGAAGTTCTCAGATTATACACACCAGCAGGAGTGCTCAGTCGTCTTGTTCAAAAGGAAACAAAACTTGGAAATAAATTGAGTTTACCAGCCGGAGTGATGTTGAGTTTCCCATTTGTTCTAATCCATCGTGATGAAGAGCTATGGGGTGAAGATGCAAATGAATTTAATCCAGAAAGATTTGCTGAGGGAGTTTCAAAAGCAACAATAACAAAGAATCAAATTGGGTTCTTCCCATTTGGATGGGGTCCTCGAATATGCCTTGGACAAAATTTTTCCATGATTGAAGCAAAAATGGCATTATCGATGATCCTTCAACGATTCTCATTTCAACTTTCACCATCGTATACTCATGCTCCTACGTCCATTTTAACTATTCAACCTCAACATGGAGCTCATATCATCCTACATAAACTTTAA 1557 38.73 MDFRVSIWIVVVVWLLGLGWRVLNFIWLRPKKLEKCLREQGLAGNPYRLYSGDLKDRAAMMLQANSKPMNFSHDIAPRVIPSIHHTIQKYGKNSFMWFGPYPRVHIMDPEQVKAAFSLINDIQKPTLDPLAKMLFDGLSSHEGPKWVKHRKIINPAFHFEKLKDMVPTMFESCNEMLINWERMISKDGFCELDVMPHLQNFAADVISRTAFGSTYEQGKIIFKDLQELTNLILKVTSQVYIPGWRFLPTKSNNRIKKLSKEIKTLLLSLINDRQRAMNAGETIHTDLLSILIESNFNEIRENGNNNNIGMSIEDMVKECKIFYLAGQETTAVLLVWTMILLSSYSKWQDRARAEVLEVFGNNKPDFDGLNRLKIVTMILNEVLRLYTPAGVLSRLVQKETKLGNKLSLPAGVMLSFPFVLIHRDEELWGEDANEFNPERFAEGVSKATITKNQIGFFPFGWGPRICLGQNFSMIEAKMALSMILQRFSFQLSPSYTHAPTSILTIQPQHGAHIILHKL 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42736561 42750299 - Hsped.09g15710.1 Hepe09g1571 580255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1571 518 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 FunFam Cytochrome P450 734A1 27 518 - -
Hepe09g1571 518 Gene3D Cytochrome P450 70 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 CDD CYP72 80 514 - -
Hepe09g1571 518 SUPERFAMILY Cytochrome P450 76 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 510 IPR050665 GO:0004497(PANTHER)
Hepe09g1571 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe09g1571 518 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe09g1571 518 Pfam Cytochrome P450 85 494 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0947 Hepe-Chr1:73845721 Hepe09g1571 Hepe-Chr9:42736561 1.14e-14 dispersed
Hepe01g1481 Hepe-Chr1:80097397 Hepe09g1571 Hepe-Chr9:42736561 3.45e-186 dispersed
Hepe01g1482 Hepe-Chr1:80106804 Hepe09g1571 Hepe-Chr9:42736561 2.29e-279 dispersed
Hepe01g1483 Hepe-Chr1:80115991 Hepe09g1571 Hepe-Chr9:42736561 6.23e-233 dispersed
Hepe09g0691 Hepe-Chr9:6609453 Hepe09g1571 Hepe-Chr9:42736561 5.94e-124 dispersed
Hepe09g0908 Hepe-Chr9:9094344 Hepe09g1571 Hepe-Chr9:42736561 1.41e-163 dispersed
Hepe09g1571 Hepe-Chr9:42736561 Hepe10g1812 Hepe-Chr10:54896365 2.07e-135 dispersed
Hepe09g1571 Hepe-Chr9:42736561 Hepe08g2561 Hepe-Chr8:67226398 4.48e-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1571 - - - 0.0