Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1585 ATGTCCAAAATCTCAGGGTGTTCGGATGAAGGTGAAAAATTAGGGAATGAGTTCAGCCATGGATGCTCGCAAATATCCCATCAAAGGCCTCAGCTTGCAGTTTCAAAGAAGAGAAGGAACTTACCAGGAACACCAGACCCGGACGCGGAAGTGGTAGCACTATCTCCAGAAACCCTAATGGCGAGAAATCGATTCGTGTGTGAAATATGCAACAAGGGATTTCAAAGAGACCAGAACTTGCAATTGCACAGGCGAGGGCACAACCTGCCATGGAAGCTAAAGCAGAGGACGAGTGGGAGCGAGACGAGGCGAAGGGTGTACGTGTGCCCGGAACCCTCGTGCGTCCACCACAATGCGGCGAGGGCACTTGGAGACCTCACCGGAATCAAGAAGCATTTTAGCAGAAAGCATGGGGAGAAGAAGTGGAAATGTGAGAAGTGCTCCAAAAAATATGCTGTTCAATCTGACTTAAAAGCTCATTCCAAAACCTGTGGCTCCAAGGAATACAAATGTGACTGCGGCACAATCTTTTCCAGGAGAGATAGCTTCATCACCCACAGAGCATTTTGCGATGCCTTAACAGAAGAAAACAACAAAGTAGTTCGTCAAGGAGCAACAATGGCTTCCACCGCCATTAATTCACCTCCCTTTCAACCTCATCTTCTCTCTCAACCTGCCCTCCCCTCGCCGCCATTAACACTGCCCCACGACCTTATGCCGATTCCTCCAAAGCCCTTAAACCTTTCTGCCGGATCCATGTTTTCATCTTCCATTTCCAACAACTCCACCACCACCACCAATCCAAACGACTGCCAGTTTCCGTCCTCCTCTGCCCTCATGTCTGCCACCGCGCTGCTGCAGAAGGCGGCGCAGATGGGAGCTGCCGTGAGCGGCTGTGGAAACTCCCTCACTTGTTTGAGCTCACCTATGATCCATCATAAGAAAGGATCTGTTACAACAATGGCTCCTTCTTCATTCGGCGGGCTATTGCCCACGACTTGTTTGCAGAAATGCCCACAAGGAAACATTTCGTCTCAGCTACCTTCCAATGGCAGAGATGTGGACATGGAGATGATCGACGACATTCCGATGCTGAATAATGGAGAGATCAATCGGTCGCACGTGGAGGTCGGGAAAAAGACGATGACACTGAATTTGTTAGGAGTTGAGGGAGGAAAGGGGAGGAACTCTCCAGCTCAAGAAAGTGTGGGGTTCGGAGGGCTTATGGAGAATATGAGTTACTTTCGACACCAAGGAGCCATGGGAAGGCAGATTTGGGAGATTTGA 1287 49.81 MSKISGCSDEGEKLGNEFSHGCSQISHQRPQLAVSKKRRNLPGTPDPDAEVVALSPETLMARNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSETRRRVYVCPEPSCVHHNAARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKVVRQGATMASTAINSPPFQPHLLSQPALPSPPLTLPHDLMPIPPKPLNLSAGSMFSSSISNNSTTTTNPNDCQFPSSSALMSATALLQKAAQMGAAVSGCGNSLTCLSSPMIHHKKGSVTTMAPSSFGGLLPTTCLQKCPQGNISSQLPSNGRDVDMEMIDDIPMLNNGEINRSHVEVGKKTMTLNLLGVEGGKGRNSPAQESVGFGGLMENMSYFRHQGAMGRQIWEI 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43517231 43523164 + Hsped.09g15850.1 Hepe09g1585 580269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1585 428 Pfam BIRD-IDD transcription factor, second C2H2 zinc finger 103 137 - -
Hepe09g1585 428 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 87 IPR013087 -
Hepe09g1585 428 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Hepe09g1585 428 Gene3D Classic Zinc Finger 64 88 - -
Hepe09g1585 428 MobiDBLite consensus disorder prediction 18 49 - -
Hepe09g1585 428 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Hepe09g1585 428 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Hepe09g1585 428 SUPERFAMILY beta-beta-alpha zinc fingers 64 162 IPR036236 -
Hepe09g1585 428 Pfam BIRD-IDD transcription factor, fourth C2HC zinc finger 168 204 - -
Hepe09g1585 428 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 27 397 IPR031140 GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe09g1585 428 SMART c2h2final6 107 137 IPR013087 -
Hepe09g1585 428 SMART c2h2final6 65 87 IPR013087 -
Hepe09g1585 428 SMART c2h2final6 142 162 IPR013087 -
Hepe09g1585 428 Pfam Zinc finger, C2H2 type 65 87 IPR013087 -
Hepe09g1585 428 FunFam protein indeterminate-domain 12-like 44 113 - -
Hepe09g1585 428 Pfam BIRD-IDD transcription factor, third C2HC zinc finger 141 165 - -
Hepe09g1585 428 Gene3D Classic Zinc Finger 99 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g1585 Hepe-Chr9:43517231 Hepe10g1107 Hepe-Chr10:43772864 6.20e-106 dispersed
Hepe01g0018 Hepe-Chr1:2446251 Hepe09g1585 Hepe-Chr9:43517231 1.21e-89 wgd
Hepe10g0981 Hepe-Chr10:36769382 Hepe09g1585 Hepe-Chr9:43517231 1.37e-18 wgd
Hepe09g1585 Hepe-Chr9:43517231 HepeContig66g0154 Hepe-ChrContig66:13039420 2.09e-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56413 PF00096 zf-C2H2 0.0042 CL0361 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1585 - - - 0.0