Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g1607 | ATGACACCAATTTTGAGCTATGTTGTGTCCAAGTGGCAAGCGTTGTCCACTTCTGATCATGCCTCTGTGGTTTCCATTAACTTATTTGTGGCCCTTCTCTGTGCTTGTATTGTCATTGGTCATCTTCTTGAGGAGACCCGGTGGATGAATGAGTCCATCACTGCCCTCTTCATTGGTCTGTTTACTGGAATCACCATTTTACTGGTCAGTGGTGGGAAAAGTTCGCATCTATTGCTCTTCAGCGAAGACACATTCTTTATTTATCTTCTGCCTCCTATTATATTCAATGCTGGATTTCAGGTGAAAAAGAAGCAGTTCTTTGTTAACTTTATGACAATTATGCTGTTTGGCGCAATTGGTACATTAATCTCTTGTACAGTCATCTCGTTAGGAGCTTTTCAGTTCTTTAAGAAAATGGATGTTGGATCACTGGATCTTGCTGATATTTTAGCAATCGGAGCTATATTTGCCGCAACAGATTCTGTATGCACATTGCAGATATTAAACCAGGATGAAACGCCTCTACTTTACAGTCTAGTATTTGGGGAGGGTGTAGTGAATGATGCTACATCTGTGGTGCTTTTCAATGCAATTCAGAGCTTAGACCTTAGTAAAATTGATGCAAGAGTTGCTGTACGTTTTATCGGGAGCTTCTTTTATTTGTTTTCAACGAGCACTCTACTCGGAGTATTTGTTGGGCTGCTGAGTGCTTATACAATCAAAAAGTTATATTTTGGCAGGCACTCGACAGATCGTGAGGTCGCTCTAATGATGCTCATGGCTTACCTTTCATACATGCTAGCTGAATTATTAGATTTGAGTGGCATTCTCACAGTGTTCTTCTGTGGAATTGTAATGTCACATTATACTTGGCATAATGTGACTGAGAGTTCAAGAGTTACAACTAAGCATGCTTTTGCTACCTTATCCTTCATTTCTGAGACGTTTATCTTCGTTTATGTCGGCATGGATGCGTTGGACATCGAGAAGTGGAGCTTTGTTAGTGATAGTCCGGGGACATCCGTTGCTGTGAGCGCAACGTTACTCGGCCTGGTTATGATTGGAAGAGCTGCTTTTGTTTTTCCATTATCATTTATATCCAACTTAGCTAAAAAATCAGATTCCGAGAAGATTACTCTCAAGGAACAAGTTATAATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCTATTGCTCTAGCTTATCATCAGTTCACCAGAGCAGGGCACACTCAACTACGAGGGAATGCAGTGATGATCACTAGTACCGTGACCATTGTCCTTTTCAGCACAATGGTTTTTGGGTTATTGACCAAGCCTCTGATACGATGGTTGACACCTCACCAAAAACACACCACCAGTATGCTATCGGACCCAGCGACTCCAAAATCATTCTCGGTACCGCTACTCGGAAGTGCACAGGATTCGGAGATGGATCTTGATGGTCCCCATATTTCTCGTCCAAGCAGTATTCGTGCACTCCTTGCGACTCCTACGCACACCGTTCATCGCTACTGGCGGAAGTTCGATGATGCCTTCATGCGTCCAATGTTCGGGGGCCGGGGTTTTGTTCCCTTTGTTCCAGGATCGCCAACCGAAAGGCGTGGGCAGTGA | 1614 | 43.56 | MTPILSYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALFIGLFTGITILLVSGGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLISCTVISLGAFQFFKKMDVGSLDLADILAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSLDLSKIDARVAVRFIGSFFYLFSTSTLLGVFVGLLSAYTIKKLYFGRHSTDREVALMMLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISETFIFVYVGMDALDIEKWSFVSDSPGTSVAVSATLLGLVMIGRAAFVFPLSFISNLAKKSDSEKITLKEQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAVMITSTVTIVLFSTMVFGLLTKPLIRWLTPHQKHTTSMLSDPATPKSFSVPLLGSAQDSEMDLDGPHISRPSSIRALLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERRGQ | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 46355457 | 46362649 | + | Hsped.09g16070.1 | Hepe09g1607 | 580291 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g1607 | 537 | Pfam | Sodium/hydrogen exchanger family | 32 | 444 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Hepe09g1607 | 537 | NCBIfam | sodium/hydrogen exchanger 3 | 24 | 457 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe09g1607 | 537 | Gene3D | - | 145 | 197 | - | - | |
| Hepe09g1607 | 537 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe09g1607 | 537 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe09g1607 | 537 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe09g1607 | 537 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe09g1607 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 17 | 527 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0090333(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g1235 | Hepe-Chr1:77591897 | Hepe09g1607 | Hepe-Chr9:46355457 | 2.31e-204 | dispersed | |
| Hepe03g0130 | Hepe-Chr3:1569976 | Hepe09g1607 | Hepe-Chr9:46355457 | 8.22e-269 | dispersed | |
| Hepe03g1940 | Hepe-Chr3:76547620 | Hepe09g1607 | Hepe-Chr9:46355457 | 5.08e-256 | dispersed | |
| Hepe07g1429 | Hepe-Chr7:47446966 | Hepe09g1607 | Hepe-Chr9:46355457 | 1.57e-45 | dispersed | |
| Hepe10g1102 | Hepe-Chr10:43626778 | Hepe09g1607 | Hepe-Chr9:46355457 | 4.96e-31 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g1607 | - | - | - | 0.0 |