Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1677 ATGGGCTATCAAGATGATGATTCTCAGAACAAGAAAAGATACGCCATCATCGGTGTCTCGTCGATGTTACTGGTAGCGATGGTGGTGGCGGTGACGGTCGGTGTTAACCTAAACCAAGACGGAAGTAGCGATCCCAACAGCGGAAGCAAGTCCCATGAAATATCTGCTTCCTTGAAAGCCATTCAAGCCATTTGCCAACCTACTGATTACAAAAAAGAATGTATTGCTAGCCTTAAAGCAGCTGGTAACAATTCTTCAGACCCTATGCAATTGGTTCAAGCTGGGTTCAAGGCTGCCGTGAAGTTAATCCAAGCTGCGGCTAATAAATCTGTGACCTTGCAAGAGATTGAGAAAGACCCTAGAGCCTCCCAAGCCCTTGCTGGCTGTAAGGAGCTCATGGATTTCTCCGTTGACGAGCTTAAATACTCGATCAACAAGCTCGGTGAGTTCGACTTTACTAAGGTCGACGAGATCTTGATCGATATCAAGATCTGGCTCAGCGCCACCATTACTTACCAGGAAACTTGCTTGGATGCATTCGAAAATACGACTGGGAAAGCGGCGGAGAAGATGAAGAAGGCATTGAAGACGTCGATGCGGTTGAGCAGCAACGGTTTGGCGATGGTGACAGAGATCTCGTCGATGTTGACGGAGTTGCAGATTCCGGGGATCAGCAAGCGACGACTTCTGGAGGAGATTCCAGTTGTCGGGCACGATGATACCCCGGAGTGGGCGAACTCTGGGATGAGACGGCTTTTCACTCTTCGAGGGAGGAAACCTAACATTGTGGTTGCCCAGGATGGAAGTGGGAAATACAAGACCATTCAAGAGGCTCTAGACAACGTTCCAAAGAGGAAGAACAACGCAACGTTTGTGATTCACATCAAAGCTGGAGTGTATAAGGAAGAGATTGTGGTGAACAAAACCCTGACCCATTTGATGATCACTGGTGATGGCCCCAAAAAGACCATCATCACTGGAAGCAAGAACTTCATTGATGGAACACCCACGTTCAAAACTGCGACTGTTGCGGTGACCGCGGAGCATTTCATGGCTAGAGACATCGGGTTCGTGAACACGGCAGGGCCGGAGAAGCACCAAGCAGTGGCACTGAGAGTCCAAGCGGACAAAGCCATCTTCTTCAACTGCGAGATGCATGGTTACCAAGACACACTCTACGTTCACACGATGCGACAATTCTACCGCGAATGCGTCGTCTCGGGGACGATCGACTTCGTCTTCGGGGACTCGGCAGCAGTGTTCCAGAACTGCACTTTCCTAGTTCGGAAGCCGCTTCCAAACCAACAATGCATCGTGACGGCGCACGGGCGGAAGGAGAAGCGTCAGCCGTCAGCTCTGATAATCCAGAACTCATTCTTCAGGGCAGACGTGGACCTGGCCCCAGTGCAAGAGCAGTACAAATCGTACCTGGGGAGACCGTGGAAGGAATATTCAAGAACCATCATAATGGAATCATACATTGGTGAGTTGATTGAGCCAGAAGGGTGGTTGCCATGGGCTGGTGACTTCGGCTTGAAGACTCTCTTTTACTCAGAGTTCAACAACTACGGTCCAGGGTCGAACAAGGCGAGGAGAGTGAGATGGAGAGGAATCAGGACCATAACTCCACAGCATGCGGTGGATTTCACTGTAGGGAGATTCATTCGTGGAGATCAATGGATTAAGCCCACCGGAGTTCCCTATGTCTCCGGCATGACAAGAACTGGCCCCGGTGCTCATAATTGA 1746 50.11 MGYQDDDSQNKKRYAIIGVSSMLLVAMVVAVTVGVNLNQDGSSDPNSGSKSHEISASLKAIQAICQPTDYKKECIASLKAAGNNSSDPMQLVQAGFKAAVKLIQAAANKSVTLQEIEKDPRASQALAGCKELMDFSVDELKYSINKLGEFDFTKVDEILIDIKIWLSATITYQETCLDAFENTTGKAAEKMKKALKTSMRLSSNGLAMVTEISSMLTELQIPGISKRRLLEEIPVVGHDDTPEWANSGMRRLFTLRGRKPNIVVAQDGSGKYKTIQEALDNVPKRKNNATFVIHIKAGVYKEEIVVNKTLTHLMITGDGPKKTIITGSKNFIDGTPTFKTATVAVTAEHFMARDIGFVNTAGPEKHQAVALRVQADKAIFFNCEMHGYQDTLYVHTMRQFYRECVVSGTIDFVFGDSAAVFQNCTFLVRKPLPNQQCIVTAHGRKEKRQPSALIIQNSFFRADVDLAPVQEQYKSYLGRPWKEYSRTIIMESYIGELIEPEGWLPWAGDFGLKTLFYSEFNNYGPGSNKARRVRWRGIRTITPQHAVDFTVGRFIRGDQWIKPTGVPYVSGMTRTGPGAHN 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 50296711 50298541 - Hsped.09g16770.1 Hepe09g1677 580361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1677 581 Pfam Pectinesterase 261 558 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Hepe09g1677 581 ProSitePatterns Pectinesterase signature 1. 287 306 IPR018040 -
Hepe09g1677 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 213 IPR035513 -
Hepe09g1677 581 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Hepe09g1677 581 SUPERFAMILY Pectin lyase-like 259 571 IPR011050 -
Hepe09g1677 581 FunFam Pectinesterase 256 572 - -
Hepe09g1677 581 PANTHER PECTINESTERASE 13 563 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Hepe09g1677 581 FunFam Pectinesterase 57 213 - -
Hepe09g1677 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 213 IPR035513 -
Hepe09g1677 581 NCBIfam pectinesterase inhibitor domain 56 211 IPR006501 GO:0004857(InterPro)
Hepe09g1677 581 CDD PMEI-like_3 63 214 - -
Hepe09g1677 581 SMART PMEI_2 56 208 IPR006501 GO:0004857(InterPro)
Hepe09g1677 581 Gene3D - 257 572 IPR012334 -
Hepe09g1677 581 Pfam Plant invertase/pectin methylesterase inhibitor 59 208 IPR006501 GO:0004857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g1677 Hepe-Chr9:50296711 HepeContig65g0050 Hepe-ChrContig65:4828376 2.40e-204 dispersed
Hepe09g1677 Hepe-Chr9:50296711 Hepe09g1678 Hepe-Chr9:50373634 1.28e-118 tandem
Hepe07g1125 Hepe-Chr7:20386608 Hepe09g1677 Hepe-Chr9:50296711 1.80e-101 wgd
Hepe09g1677 Hepe-Chr9:50296711 HepeContig66g0115 Hepe-ChrContig66:7762778 1.18e-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1677 K01051 - csv:101207393 972.23