Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1703 ATGAGTCAGACAGAAGTATCAAGGATAAAAACCCCTCTCGTTCCTCTCGCTACTTTGATCGGTCGCGAGCTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCGGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTGATCAAACTTGATTGCCACCGTATTCCTGGAAACCCTTCAACTGCATTTTCTGTCTTTGCGATTTTTGATGGGCATAATGGTATATCAGCTGCTATCTTTGTCAAGGAACAGTTACTGAGCAATGTCCTAAGTGCAATTCCTCAAGGGGCCAGTCGAGAAAAATGGCTGCAAGCCCTTCCTCGAGCATTAGTTGCTGGTTTTGTCAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGCTGGACTGTTACTGTTGCGTCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACGGTCGATCATAGGCTGGAGGAAAATGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAAGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTCGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCTATACCACATGTTAAGCAAGTGAAGCTTTCCAATGCTGGCGGAAGGCTAATAATTGCTTCTGATGGTATATGGGACGCTTTATCGTCTGATATGGCTGCCAAGTCTTGTCGAGGTTTACCTGCAGAGCTTGCTGCTAAGCTGGTTGTAAAGGAAGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATCCCATCCGAGCAACCTATATTATTACCATCAACTCCAAGGAAGAAGCAAAATGTACTCACCTCACTCTTTGGGAAGAAATATCAAAACTCTTTGGGTAAATCTGCAAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGTTCTGCTATGCTTGCTGAAAGGCTAGGAAAAGATTTTCCTTCAGATCCAAACTCAGGGATCTTCAAATGTGCAGTGTGTCAAGCGGATCAACCCCCAAACGAAAATTTGTCGATGAATTCGGGGCCATTCTTTTCACCGTCGTCAAAGCCATGGGAAGGTCCGTTCCTCTGTGCGACTTGTCGGAAAAAAAAAGACGCCATGGAAGGCAAAAGGCCAACAAAACCTACAATAACCATTTAG 1287 45.14 MSQTEVSRIKTPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCHRIPGNPSTAFSVFAIFDGHNGISAAIFVKEQLLSNVLSAIPQGASREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPSTPRKKQNVLTSLFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQADQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPTKPTITI 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 51781406 51785507 + Hsped.09g17030.1 Hepe09g1703 580387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1703 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Hepe09g1703 428 Gene3D - 38 302 IPR036457 -
Hepe09g1703 428 SMART PP2C_SIG_2 46 297 IPR001932 -
Hepe09g1703 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Hepe09g1703 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe09g1703 428 SMART PP2C_4 23 295 IPR001932 -
Hepe09g1703 428 Pfam Protein phosphatase 2C 62 280 IPR001932 -
Hepe09g1703 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Hepe09g1703 428 CDD PP2Cc 43 297 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1170 Hepe-Chr1:76848447 Hepe09g1703 Hepe-Chr9:51781406 4.12e-209 dispersed
Hepe01g1748 Hepe-Chr1:82629468 Hepe09g1703 Hepe-Chr9:51781406 1.03e-165 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1703 - - - 0.0