Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1705 ATGACTTCTTTTGTGAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCATTGCAAGCCCTTCATGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTCAAGTATGTTGAGCTTTGTGTGGATATGAGGAAAGGGAGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAACAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCTTTAGAAGAAGCTCTGGATGTTGACGATTTGGAAGCAGATAAAAGACCTGAAGATCTGATGCTTAGTTATGTCAGTGGGGAAAAGGGAAAGGATAGATCTGATCGCGAACTTGTTACCCCTTGGTTTAAATTTTTATGGGAGACATATCGAACGGTTCTTGAGATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCCCATCGGGCCTTCCAGTTCTGTAAGCAGTATAAAAGAACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGAGATCGGCCCGACCTATCCGCTCCAGAGAGCTTGCAATTGTACCTTGACACTAGATTTGAACAGCTGAAGGTTGCCACAGAGCTCGAGCTCTGGCAGGAAGCTTTCCGTTCCGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACGCCTAAACCATCCTTGATGGTTGTTTATTATGTCAAATTAACAGAGATCTTCTGGATATCAGATAGCAACCTCTATCATGCCTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGACTTGCAGCTGATAGCATCATCCGTTCTTTTAGCAGCTCTTGCAGTGTCTCCCTATGACTCTAAGCATGGTGCTTCACATTTAGAACTTGAACATGAGAAGGAACGGAATTTAAGGATGGCTAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGGGCAAATCTTCTTTCTGATTTGGTGTCTAAAGGAGTCTTGAGCTGCGCAACTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGATTTTTTCCCTCTTGATCTTGCAACAAAATTACAACCCTTACTGAACAAAATATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCCGAAGTGCAATTGTCCCAATATGTTCCAGCTCTTGAAAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTATCTCAGATGATCCCATATTTTGATTTTTCTGCCGTGGAGAAAATATCTGTCGATGCAGTTAAACAGAATTTCATTGCCATGAAAGTTGATCATTCAAGGAACATTGTGTTATTTGGCAATTTGGGTATTGAATCAGATGGACTTCGAGACCATCTGACTGTTCTTGCTGAATCCTTGAACAAAGCAAGAGCTATGATCTATCCTCCAGTAAGGAAAACATCAAAAACAGGTGAGATATTGCCTGATTTGGCAGATACTGTTGATAAAGAGCACAAGAGGCTTCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAAGAATCAAAAAGGTTAAAATTACTAAAGATAACTGAAGAGGCTGAGCAGAAGCGGCTTGCTTTAGAATATGAACAAAGGAAAAGTCAACGGCTTCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGATTCTGAGAAGTTGACGAAACAAACTTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTACAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCTGCAACGTTGATTGAAGCTGCATTTCAGCAACGTTTGCTCGAAGAGAGAATGATTCATGAACGTGATCAGCAGCTGGAGGTTGAGGTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAGAAGAATCGATTGGTTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTAGTCTTCGTCAAGAGGAGTTCGACAGACGTAGATCTGAGAGAGAAGAACAGATCCGACAAATAATTCAGGCTCGGAAAGCAGAAAGGGATGATAAGAGGAAGAAAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTACAAAATTGCGTGAAGAGGAGGAAGCACGCAAGCGCGAAGAAGCCGAGAGGAGAAAGAGAGAAGATGCTGAGCGCAAGGCAAAATTGGATGAGATTGCTGAGAAGCAGAGGCAGAGGGAGCGAGAATTGGAAGAAAAAGAAAAACTCCGGAAAGAAATGCTCTATGGTGGTGGCAAACCAGCTGATGTGCCTGCTAGACCTGATGTTGCTCCTGGTTCTCGGCCTCTGGAGTCTGGGAATGCTGCACCGGCTGCTGCTGCTGCGGCGGCTGCCGCCCCATCTGGAAAATATGTGCCAAGGTTCCGACTGTCTGAAAGCTCCAGCCCTAATGCACCACCATCAACTGAATCTGACCGATGGGGAAGCAGCAGGCCTGATAATCGACCATCACAACCGGACAGCTGGCGCAGTGATGATCGTAAACCTGCGTTTGGAAGTTCAAGGTCATCATGGTCCTCGTCTCGAGTTCCTGCTCGTGGTAGCACGAATCGCTGA 2913 43.08 MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSDLVSKGVLSCATQEVKDLYHLLEHDFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPYFDFSAVEKISVDAVKQNFIAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPVRKTSKTGEILPDLADTVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLKLLKITEEAEQKRLALEYEQRKSQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERDQQLEVEVSKQRHEGDLKEKNRLVRMLESKKIFQERVISLRQEEFDRRRSEREEQIRQIIQARKAERDDKRKKIFYVRREEERITKLREEEEARKREEAERRKREDAERKAKLDEIAEKQRQRERELEEKEKLRKEMLYGGGKPADVPARPDVAPGSRPLESGNAAPAAAAAAAAAPSGKYVPRFRLSESSSPNAPPSTESDRWGSSRPDNRPSQPDSWRSDDRKPAFGSSRSSWSSSRVPARGSTNR 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 51818809 51826286 - Hsped.09g17050.1 Hepe09g1705 580389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1705 970 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 961 IPR027512 GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER)
Hepe09g1705 970 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Hepe09g1705 970 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Hepe09g1705 970 Coils Coil 93 120 - -
Hepe09g1705 970 Pfam PCI domain 438 508 IPR000717 -
Hepe09g1705 970 MobiDBLite consensus disorder prediction 950 970 - -
Hepe09g1705 970 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 945 IPR027512 GO:0005852(InterPro)
Hepe09g1705 970 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Hepe09g1705 970 Pfam eIF3a, PCI domain, TPR-like region 8 407 IPR054711 -
Hepe09g1705 970 Gene3D - 269 343 - -
Hepe09g1705 970 Gene3D - 363 494 - -
Hepe09g1705 970 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 IPR000717 -
Hepe09g1705 970 MobiDBLite consensus disorder prediction 813 861 - -
Hepe09g1705 970 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Hepe09g1705 970 Coils Coil 610 649 - -
Hepe09g1705 970 Coils Coil 732 752 - -
Hepe09g1705 970 MobiDBLite consensus disorder prediction 907 936 - -
Hepe09g1705 970 Coils Coil 799 858 - -
Hepe09g1705 970 MobiDBLite consensus disorder prediction 813 970 - -
Hepe09g1705 970 Coils Coil 669 699 - -
Hepe09g1705 970 Coils Coil 561 600 - -
Hepe09g1705 970 Gene3D UVR domain 217 268 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1705 K03254 - csv:101209344 1529.23