Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1731 ATGGTTTGTGAAGAAGAAGCTCTAATCCAAAAAGTCTGTGATCTGTATGACCAAATCTCTTGCCTTGAAAGCCTCAAACCTTGTAACAATGTCGACACTCTTTTCACTCAGTTGGTTCTCACGTGCATGCCACCCACCAAAGATTTTCACATCAGTTCACTCTCAAAACAACTTCAACAAATGAGATCAAATCTCATTCGCCTTTGTGGCCAAGCTGAGTCCCTTTTGGAGTTTCATTTCTCTGATCTCTTAGCAAAATTTGATTCCCCTCTTGACAACCTCCATGTCTTCCCTTACTTCTCCAATTACCTCAAACTTAGCCTCCTTGAATTCTCCATCCTCCGCCGCCACTGCCCCACCCTCCCCTCCGCCGTCGCCTTTGTCGGCTCTGGCCCTCTTCCTCTTACCTCTATCGTCCTCGCCACCCGCCACCTCACCTCCACTGCCTTCCACAACTACGATCTCGACCCACTTGCTAATTCCCAGGCGTCGAATTTGGTATCGCTGGACCCGGACCTGAAAACAAGGATGGTGTTTCACACTTGCGACATCATGAAAGTGAGCGAGGAGCTGAAACAGTACGAGGTTGTGTTTTTGGCAGCTCTTGTAGGAATGGATAAAGAGGAGAAATTGAGGGTGATTGAGCATTTGTCGGAGTTCATGTCGGAAGGAGCTTATTTGATGGTGAGAAGTGCACATGGAGGAAGGGCTTTTCTTTATCCTGTGGTTGAGGATTGTGATTTGGTAGGGTTTGAAGTTCTAACTGTGTTTCATCCCACTGATGAGGTTATAAACTCCGTAATAATTGCACGGAAAAAGACGAGATCAGAATACGAAGACGAGGACGACGACGACAACAACAACGACCACGATGATCAGAAGAAGGTGATGATTAGCAGTGGTATTGAAAATGGTGTTGTGCATAATAATAATAATAATAATAATAATAATAATAAATGTTCTGATGAAATTCAGAGCTTCAATAATCATGGAGGTATGATTGAGGAATTTGCCATGGAAGCTGAGTAA 1029 44.31 MVCEEEALIQKVCDLYDQISCLESLKPCNNVDTLFTQLVLTCMPPTKDFHISSLSKQLQQMRSNLIRLCGQAESLLEFHFSDLLAKFDSPLDNLHVFPYFSNYLKLSLLEFSILRRHCPTLPSAVAFVGSGPLPLTSIVLATRHLTSTAFHNYDLDPLANSQASNLVSLDPDLKTRMVFHTCDIMKVSEELKQYEVVFLAALVGMDKEEKLRVIEHLSEFMSEGAYLMVRSAHGGRAFLYPVVEDCDLVGFEVLTVFHPTDEVINSVIIARKKTRSEYEDEDDDDNNNDHDDQKKVMISSGIENGVVHNNNNNNNNNNKCSDEIQSFNNHGGMIEEFAMEAE 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 53995278 53996882 + Hsped.09g17310.1 Hepe09g1731 580415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1731 342 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Hepe09g1731 342 Pfam Nicotianamine synthase protein 5 274 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Hepe09g1731 342 PANTHER NICOTIANAMINE SYNTHASE 3 5 293 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Hepe09g1731 342 Gene3D Vaccinia Virus protein VP39 6 274 IPR029063 -
Hepe09g1731 342 MobiDBLite consensus disorder prediction 274 293 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2258 Hepe-Chr8:62329087 Hepe09g1731 Hepe-Chr9:53995278 9.11e-85 dispersed
Hepe09g0493 Hepe-Chr9:4585482 Hepe09g1731 Hepe-Chr9:53995278 2.06e-96 transposed
Hepe08g2257 Hepe-Chr8:62313995 Hepe09g1731 Hepe-Chr9:53995278 1.34e-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1731 K05953 - csv:101218907 523.857