Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1764 ATGACAAATTATTATGATATTGATGACATTCTGACAGAGGAAGAGCTTGTCTCAGTTATGTTCCAAAAGTCTGTCAATGGAGTTGGAATCGATCCCAGTTCTCATACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTCGCACAAGAGCTACATCATAGGCAAGTGGCAGTTATGGGCTTACCTGGTTGTTTCAATCAAAGAACCCGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGTCTATACTTCTATGAATTTGGATGCAAGATCGCACCACTGGTTGGCGATAGAACGATCGGTTCTTGGCTTTTATCCACATTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACTCCATAGTGTTTGCTGCAAGTTCAAAATACTTGACAATTCTATCAAAAGAAGAAACCAAAATGTATGAGGCGGCTCAATCCTCAATGACAGCCTTTAAGAAATGGCGGATGGGTGGACCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAGAGGAAGTCATCTGAGTAG 558 41.94 MTNYYDIDDILTEEELVSVMFQKSVNGVGIDPSSHTDSVESGSKVELPFWLAQELHHRQVAVMGLPGCFNQRTRLEIQADAAFVDLRSRCLYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSIVFAASSKYLTILSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLGRKRKSSE 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 54923089 54926588 + Hsped.09g17640.1 Hepe09g1764 580448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1764 185 Gene3D - 2 166 IPR038437 -
Hepe09g1764 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Hepe09g1764 185 Pfam GINS/PriA/YqbF domain 5 55 - -
Hepe09g1764 185 CDD GINS_A_psf3 65 167 - -
Hepe09g1764 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
Hepe09g1764 185 CDD GINS_B_Psf3 4 66 - -
Hepe09g1764 185 PANTHER UNCHARACTERIZED 1 183 IPR010492 GO:0000811(PANTHER)|GO:1902975(PANTHER)
Hepe09g1764 185 Pfam GINS complex protein helical bundle domain 66 165 IPR021151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1764 K10734 - csv:101203869 338.576