Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1772 ATGCCCAAGCTTTTGCTCCTGCTCCTTGGGTTTCTCTTATCACTGCCTTTTACCAATTGGGTTCATGCCTTTCACTCCTATAATCTCTCTGATTCTTCTCTCTTCGATTCTTATGAATCTTCCTTTGCTACCACCACTCTTAATCCTCTCATGGTCGGACTCACTCTCATTCATGGAGCTGATGCTAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCATTTGCATCGTGGATATGGATCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAATAATATCAGGAATTGTGTCTATCGGAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACTGGAATTCTGAGCAACAGAGCTGAAGAAAACCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCTGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAACGGATTTGGTTGGTTGCAATGGAAGCATTGAAGGCCGAGGGAATGCGATTTGCTAAACAGGCCTTGCTTTCTGGCTGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTCGAGACTTATTTTCAAGAACTACTAAAGTGAAATGTCTGAGTGATGCTGGTTTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTACATTAGGAACTTATTTGGTGGCGTGGTGGGCTTGCAGGGAGCAGGAAGGAATCTGCCATCCGTCTGTACTAACCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCAGCATACGATTCCTGGCAGATACAATCTAGTTTAGCCCCACCTTCTCTGGATCCGGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAGTGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTGGGGATTTCTCAAAATCTTATAAAAATGGTTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGATACATGGTTCGGCGACAATTCTCCCGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATCGAGCAGCGGTGAAAGCGATCGATTGTCCCTATCCTTGCGACAGGACTTGCCACCATCTGGTTTTTAGAAGCGGTTAG 1254 43.86 MPKLLLLLLGFLLSLPFTNWVHAFHSYNLSDSSLFDSYESSFATTTLNPLMVGLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLVAMEALKAEGMRFAKQALLSGCSAGGLASILHCDEFRDLFSRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVGLQGAGRNLPSVCTNHLDPTSCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVGDFSKSYKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLVFRSG 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 55498252 55503183 - Hsped.09g17720.1 Hepe09g1772 580456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1772 417 PANTHER NOTUM-RELATED 48 411 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Hepe09g1772 417 Pfam Pectinacetylesterase 48 394 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0853 Hepe-Chr4:62800130 Hepe09g1772 Hepe-Chr9:55498252 4.04e-153 dispersed
Hepe09g1772 Hepe-Chr9:55498252 Hepe10g1467 Hepe-Chr10:51550209 5.53e-217 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1772 K19882 - csv:101218273 806.208