Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1785 ATGCCTCACACACTTTGGGTGTGTATCCTTGGTTTCCTCGATGAAGAGCTTGTTGATCTATACTACAATGGTTTTTGCAACAATATTTTATGGACATTGTTTCATTACTTTGGCCTTCCTCAAGAAGATGATGTTGCAACCACTGATTGTCAGTTTGTGACATACAAGAAGGCAAACCAAATGTTTGGGGATGAAGTTAATAAACACTACGAAGAGGGTGATGTTATTTGGTGCCACGATTATAATCTTATGTTTCTTCCAAAATTACTGAAAGAACATAATCCTAAGATGAAAGTCGACTGGTTTCTCCCTACACCTTTTCCTTCCCATGAAACCTACAAAACCCTCCCCTCCCGATCAGAGCTTCTGCACTCGATACTTGTTGTTGATCTTGATGGATAA 402 39.3 MPHTLWVCILGFLDEELVDLYYNGFCNNILWTLFHYFGLPQEDDVATTDCQFVTYKKANQMFGDEVNKHYEEGDVIWCHDYNLMFLPKLLKEHNPKMKVDWFLPTPFPSHETYKTLPSRSELLHSILVVDLDG 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 56152026 56154709 + Hsped.09g17850.1 Hepe09g1785 580469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1785 133 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 10 131 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Hepe09g1785 133 Gene3D Glycogen Phosphorylase B; 6 133 - -
Hepe09g1785 133 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 131 - -
Hepe09g1785 133 Pfam Glycosyltransferase family 20 9 131 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g1785 Hepe-Chr9:56152026 Hepe10g1655 Hepe-Chr10:53239067 6.17e-25 dispersed
Hepe09g1783 Hepe-Chr9:56110966 Hepe09g1785 Hepe-Chr9:56152026 1.86e-57 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1785 K16055 - csv:101204478 202.601