Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1825 ATGGATCAGCAAGGGCATGGCCAACCTCCATCCATGGGAGCGGTTGGCAGTGGTGGTCAGATGGCATATGGTAGCAACCTGTACCATCCCAGCCAAATGACTGTAGGCCCGACTTCCGGATCTGTCGGAGGTATTCAGTCTACGAGTCAACCTGGTGGAGCACAACTTGCTCAACATCAACTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTTTGGGCAAATCAATACCAAGAGATTGAGAAGGTAACCGACTTCAAGAACCATAGTCTTCCGTTAGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGACGTACGAATGATATCAGCTGAGGCACCGGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACCGAAGAGAACAAGCGTAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATTGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACGTCGATTCCAAGAGGATCAATAACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTCGGGGCGCCTGGAATGATTATGGGTAAGCCCGTGATGGACCCAACCATGTATGCTCAGCAATCGCACCCTTACATGCCTCCACAAATGTGGCAACACGCACAAGATCAAATCCCTCCTGATCAATAG 771 48.25 MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQIPPDQ 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 57828189 57831443 - Hsped.09g18250.1 Hepe09g1825 580509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1825 256 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 72 185 IPR050568 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Hepe09g1825 256 FunFam Nuclear transcription factor Y subunit gamma 64 177 - -
Hepe09g1825 256 Gene3D Histone, subunit A 61 177 IPR009072 GO:0046982(InterPro)
Hepe09g1825 256 MobiDBLite consensus disorder prediction 26 53 - -
Hepe09g1825 256 SUPERFAMILY Histone-fold 67 171 IPR009072 GO:0046982(InterPro)
Hepe09g1825 256 Pfam Core histone H2A/H2B/H3/H4 60 162 IPR007125 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0787 Hepe-Chr2:8894504 Hepe09g1825 Hepe-Chr9:57828189 3.45e-81 dispersed
Hepe09g0045 Hepe-Chr9:366379 Hepe09g1825 Hepe-Chr9:57828189 1.21e-65 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56421 PF00808 CBFD_NFYB_HMF 2.70E-18 CL0012 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1825 K08066 - csv:101209664 448.743