Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe09g1825 | ATGGATCAGCAAGGGCATGGCCAACCTCCATCCATGGGAGCGGTTGGCAGTGGTGGTCAGATGGCATATGGTAGCAACCTGTACCATCCCAGCCAAATGACTGTAGGCCCGACTTCCGGATCTGTCGGAGGTATTCAGTCTACGAGTCAACCTGGTGGAGCACAACTTGCTCAACATCAACTTGCTTATCAGCATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTTTGGGCAAATCAATACCAAGAGATTGAGAAGGTAACCGACTTCAAGAACCATAGTCTTCCGTTAGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGACGTACGAATGATATCAGCTGAGGCACCGGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACCGAAGAGAACAAGCGTAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATTGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACGTCGATTCCAAGAGGATCAATAACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTCGGGGCGCCTGGAATGATTATGGGTAAGCCCGTGATGGACCCAACCATGTATGCTCAGCAATCGCACCCTTACATGCCTCCACAAATGTGGCAACACGCACAAGATCAAATCCCTCCTGATCAATAG | 771 | 48.25 | MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQSHPYMPPQMWQHAQDQIPPDQ | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 57828189 | 57831443 | - | Hsped.09g18250.1 | Hepe09g1825 | 580509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe09g1825 | 256 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 72 | 185 | IPR050568 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Hepe09g1825 | 256 | FunFam | Nuclear transcription factor Y subunit gamma | 64 | 177 | - | - | |
Hepe09g1825 | 256 | Gene3D | Histone, subunit A | 61 | 177 | IPR009072 | GO:0046982(InterPro) | |
Hepe09g1825 | 256 | MobiDBLite | consensus disorder prediction | 26 | 53 | - | - | |
Hepe09g1825 | 256 | SUPERFAMILY | Histone-fold | 67 | 171 | IPR009072 | GO:0046982(InterPro) | |
Hepe09g1825 | 256 | Pfam | Core histone H2A/H2B/H3/H4 | 60 | 162 | IPR007125 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0787 | Hepe-Chr2:8894504 | Hepe09g1825 | Hepe-Chr9:57828189 | 3.45e-81 | dispersed | |
Hepe09g0045 | Hepe-Chr9:366379 | Hepe09g1825 | Hepe-Chr9:57828189 | 1.21e-65 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56421 | PF00808 | CBFD_NFYB_HMF | 2.70E-18 | CL0012 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe09g1825 | K08066 | - | csv:101209664 | 448.743 |