Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe09g1833 ATGGAAGAAGTTACCAATTCAACTTCATCATCGCCACCACTAAAAACCCACATCCATAACCACAAAAACAACTCCAATGTCCACCACCACCACAACAACCACCACCCCAATGCCATTCTCAGCTCCAATTCCTTCCTCATCATCATAGCCTCAATCATCTCCATCACCATTCTCCTTGCCATCCTCCTCCTCATCTTCATGCTCCTCCGCCTCAAATCCGCTCGAAACACCGCCACCGCCGCCTCCACCGCCGTCCCCCACACAGCCATCCATTTTGACTCAAGCCCAGAAGTGAAGGGGGGTGGGTGCTTATATGCAGGGAATTCAGGGAGAATTCCTCAGTACAGAATTAGGGGAGTTCAAGTTTTCACTTACAAGGAACTGGAATTAGCCACTGATAACTTCAGTGAACATAATGTGATTGGAATTGGAAATGGAAGATTTGGGATTGTGTATAGAGGTGTTCTTGCTGATGGAGCTGTTGTTGCCATTAAAATGCTTCATACAGATGGCAAGCACAGAGAACGTGCTTTCAGAATGGAGGTGGATCTGCTAAGCCGCTTGCACTCACCTTGTTTGGTAGAGTTGCTTGGCTACTGCGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGTACTCTCCATCATCATCTTCATAATCCCAACAGTGAATCTCGCCCATTGGATTGGAATACTAGATTGAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTCCTACATGAGCATGCAGTTCCATCTGTTATCCATAGAAACTTCAAGTGCACCAATGTTCTTCTGGATCAGGATTTTCGAGCCAAGGTGTCCGATTTCGGTTCGGCCAAGATGGGATCGGATAAGATCAACGGTCAAATATCTACACAAGTACTCGGAACCACAGGATATCTAGCACCAGAGTATGCTTCAACAGGTAAACTTACAACAAAGTCAGATGTATACAGCTATGGTGTTGTGCTGCTAGAGCTATTGACCGGTCGAGTGCCGGTCGATATCAAGCGGCCGCAGGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAAACTAACTAATAGAGAAAAAGTAGAGAAAATGATTGACCCAACTATTCAAGGAAAATACTCTAAGAAGGATCTAGTACAGGTAGCAGCCATTGCAGCGATGTGTGTGCAGCCCGAACCCGACTACCGGCCTCTGATGACCGATGTCGTGCAGTCACTGGTTCCGCTAGTTAAGAACCCGTCGTCATCGTCTAGATTCTTCAATTGA 1278 46.64 MEEVTNSTSSSPPLKTHIHNHKNNSNVHHHHNNHHPNAILSSNSFLIIIASIISITILLAILLLIFMLLRLKSARNTATAASTAVPHTAIHFDSSPEVKGGGCLYAGNSGRIPQYRIRGVQVFTYKELELATDNFSEHNVIGIGNGRFGIVYRGVLADGAVVAIKMLHTDGKHRERAFRMEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESRPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPKLTNREKVEKMIDPTIQGKYSKKDLVQVAAIAAMCVQPEPDYRPLMTDVVQSLVPLVKNPSSSSRFFN 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 58375293 58378161 + Hsped.09g18330.1 Hepe09g1833 580517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe09g1833 425 MobiDBLite consensus disorder prediction 1 34 - -
Hepe09g1833 425 SUPERFAMILY Protein kinase-like (PK-like) 114 410 IPR011009 -
Hepe09g1833 425 MobiDBLite consensus disorder prediction 1 20 - -
Hepe09g1833 425 ProSiteProfiles Protein kinase domain profile. 137 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe09g1833 425 FunFam Somatic embryogenesis receptor kinase 1 107 212 - -
Hepe09g1833 425 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524(InterPro)
Hepe09g1833 425 FunFam Receptor-like serine/threonine-protein kinase ALE2 213 424 - -
Hepe09g1833 425 Pfam Protein tyrosine and serine/threonine kinase 143 410 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe09g1833 425 PANTHER OS01G0750732 PROTEIN 5 415 IPR050885 -
Hepe09g1833 425 CDD STKc_IRAK 143 413 - -
Hepe09g1833 425 Gene3D Transferase(Phosphotransferase) domain 1 213 422 - -
Hepe09g1833 425 Gene3D Phosphorylase Kinase; domain 1 108 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1655 Hepe-Chr3:73408316 Hepe09g1833 Hepe-Chr9:58375293 1.94e-87 dispersed
Hepe07g1859 Hepe-Chr7:62070461 Hepe09g1833 Hepe-Chr9:58375293 1.49e-34 dispersed
Hepe09g1833 Hepe-Chr9:58375293 Hepe10g0230 Hepe-Chr10:2432494 6.57e-86 dispersed
Hepe09g1833 Hepe-Chr9:58375293 Hepe02g0107 Hepe-Chr2:1276730 1.14e-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73154 PF07714 PK_Tyr_Ser-Thr 9.10E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe09g1833 - - - 0.0