Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe09g1861 | ATGGCTGGCGAATCTAACACCATGTTTATTGATTTCGCTCACCTCATGCACTCCAATGATCTTCTTCACATAGCAATCGCCGACGAATATCTGAGGTTTGAACCATACCTCAAGAACGCTTGTAAGCGATTCGTAATGGAGCATAATCCTTCTTTCATCGCTGACGATAACCCCTTCAAGGACATAAATGTCGCTTTCTTCAACATTCCTGTCTATAAAAGGTTGAGAGAGTTGACTACTGCAGAAATTGGGAAATTAGTATCTGTGACAGGAGTGGTGACGCGGACAAGCGAGGTCCGACCAGAGCTTCTACAAGGGACCTTCAAGTGCTTAGAATGTGGAAATGTCATGAAGAATGTCGAACAACAATTTAAGTACACGGAGCCAAGAATATGCATGAACCCAACCTGTTCGAATAGAACAAGGTGGGCATTACTTCGGCAAGAGAAGACTTCAAAGGAGATACCGGCTGACTCTCTTCCACGATCTTTGGATGTTATTCTTCGCGATGAGATGGTCGAACGTGCCAGGGCTGGAGACACGGTCATCTTCACGGGTACAGTAGTTGTTGTACCAAATATATTAGCATTAGCCTCTCCAGGAGAAAGAGCAGAATGTCGACGAGAAGCTTCAGAGCGAAGTAACTCTGCGGTTGGACACGAAGGAATGAGGGGGCTACGAGCACTAGGAGTGAGGGACTTGTCCTATCGCCTAGCCTTTATTGCCAATTCAGTTTTAGATGGCAGAAGGGATTTTGATATTAGAAACAGGAAAAAGGATGCGAATGAAGATAACCAACAGTTTACCGTCAATCTTGCAATATCTAGTTTTAATTTTAAATGCTTATACATTAGGCATATTACTTACAAATTTTAA | 876 | 43.15 | MAGESNTMFIDFAHLMHSNDLLHIAIADEYLRFEPYLKNACKRFVMEHNPSFIADDNPFKDINVAFFNIPVYKRLRELTTAEIGKLVSVTGVVTRTSEVRPELLQGTFKCLECGNVMKNVEQQFKYTEPRICMNPTCSNRTRWALLRQEKTSKEIPADSLPRSLDVILRDEMVERARAGDTVIFTGTVVVVPNILALASPGERAECRREASERSNSAVGHEGMRGLRALGVRDLSYRLAFIANSVLDGRRDFDIRNRKKDANEDNQQFTVNLAISSFNFKCLYIRHITYKF | 291 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 59254830 | 59269300 | - | Hsped.09g18610.1 | Hepe09g1861 | 580545 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe09g1861 | 291 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 72 | 84 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe09g1861 | 291 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 222 | 243 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe09g1861 | 291 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 122 | 139 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe09g1861 | 291 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 30 | 42 | IPR008049 | GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro) | |
| Hepe09g1861 | 291 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 5 | 262 | IPR031327 | GO:0000727(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006268(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER)|GO:1902969(PANTHER)|GO:1990518(PANTHER) | |
| Hepe09g1861 | 291 | Gene3D | - | 102 | 148 | - | - | |
| Hepe09g1861 | 291 | FunFam | DNA helicase | 102 | 151 | - | - | |
| Hepe09g1861 | 291 | Gene3D | - | 1 | 71 | - | - | |
| Hepe09g1861 | 291 | SMART | mcm | 71 | 290 | IPR031327 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
| Hepe09g1861 | 291 | Pfam | MCM N-terminal domain | 4 | 68 | IPR027925 | - | |
| Hepe09g1861 | 291 | SUPERFAMILY | Nucleic acid-binding proteins | 4 | 192 | IPR012340 | - | |
| Hepe09g1861 | 291 | Pfam | MCM OB domain | 75 | 191 | IPR033762 | - | |
| Hepe09g1861 | 291 | Gene3D | - | 75 | 191 | IPR012340 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe09g1855 | Hepe-Chr9:59130146 | Hepe09g1861 | Hepe-Chr9:59254830 | 9.90e-150 | dispersed | |
| Hepe09g1860 | Hepe-Chr9:59246345 | Hepe09g1861 | Hepe-Chr9:59254830 | 1.69e-168 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe09g1861 | K02542 | - | csv:101219775 | 468.003 |