Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0002 ATGGCAGCTCGGAGGGTATCCTCGCTCTTATCTCGTTCTTCACCTGCCGCTCTCCTTTCCAAAGGGAGGAGGCCTTCCGGTGGCAGAACAAGTGGCAAATATAGCACTACGGCTGCTGTTGAACACCCGATTACTCCATCTGTGAAAGTAAACTATACCCAGCTATTAATCAACGGAAAGTTTGTGGATTCAGTCTCAGGAAAAACTTTTCCTACGTTGGATCCCAGGACTGGGGAAGTCATTGCCCAAGTTGCTGAAGGTGACGCCAAAGATGTTGATCTTGCAGTTTCCGCTGCACGCAAGGCATTTGATGAAGGGCCTTGGCCTAGGCTGACTGCTTATGAAAGATCAAAGATACTTTTGCGGTTTGCTGATTTGGTTGAAAAGCATGTCGAAGAAATTGCAGCACTCGAAACTTGGGACAACGGGAAAACATACGAACAGTCAGCCAAACTGGAGGTCCCAATGTTCGTACGCCTCTTTCGATACTATGGCGGATGGGCGGATAAGATTCACGGACTCACAGTTCCAGCTGATGGGTCGTATCATGTGCAGACCTTGCACGAACCAATTGGTGTTGCGGGTCAGATTATTCCATGGAACTTTCCTCTTATCATGTTTGCTTGGAAGGTTGGTCCAGCATTGGCATGTGGGAATACTGTTGTTCTCAAGACAGCCGAGCAGACACCTTTGTCCGCTCTCTATGTGGCTAACCTATTGCATGAGGTACATTTTGGCCAATTCACTCACATATATCAATCACCCTGCCCTTACTTCATAGTTCATATATATATATATATATGGCAGGCTGGACTTCCTGAGGGCGTTCTCAATATTGTTTCTGGTTATGGACCCACTGCTGGTGCTGCTCTTGCCAGTCATATGGAAGTTGATAAGCTTGCTTTTACTGGATCCACCGAAACAGGGAAGGTTGTACTTGAACTAGCTGCAAAAAGCAATCTGAAGCCAGTAACATTGGAGCTTGGTGGAAAATCCCCTTTCATCGTATGTGAGGATGCTGATGTGGATAAGGCTGTCGAGATGGCACACTTTGCTATCTTCTTCAACCAGGGACAATGCTGCTGTGCTGGTTCTCGTACTTTTGTTCATGAAAAAGTATATGATGAGTTTGTAGAGAAAGCAAGGAAACGAGCTGCCAACCGCGTTGTTGGTGATCCATTCCTAGGTGGAATTGAGCAAGGTCCTCAGGTCGATGGCGAACAATTCAAAAAGATTTTGAGATATATACAATATGGGATTGAAGGTGGAGCCACTCTTGAAGCTGGAGGAGAGAGGTTTGGTTCCAAGGGTTACTATGTCCAGCCGACAGTTTTCTCAGACGTCAAGGATGACATGAAAATTGCACAGGAGGAGATTTTTGGTCCTGTACAGACAATCTTGAAATACAAGGATATTGAGGAGGTGATAAGGAGGGCAAATGCTAGTCGCTATGGGCTGGCGGCCGGGGTGTTTACTCAAAATATCGACACAGCCAACAGGCTGACACGTGCGCTGAGAGTTGGGTCTGTGTGGATCAATTGCTTTGATATATTTGATGCTGCAGTTCCTTTTGGTGGGTACAAGATGAGCGGACATGGGCGAGAAAAGGGCATTTACAGCCTCAGCAATTACCTGCAAATCAAGGCTGTTGTCACTCCTTTGCACAACCCTGCTTGGCTTTAA 1683 46.52 MAARRVSSLLSRSSPAALLSKGRRPSGGRTSGKYSTTAAVEHPITPSVKVNYTQLLINGKFVDSVSGKTFPTLDPRTGEVIAQVAEGDAKDVDLAVSAARKAFDEGPWPRLTAYERSKILLRFADLVEKHVEEIAALETWDNGKTYEQSAKLEVPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTVVLKTAEQTPLSALYVANLLHEVHFGQFTHIYQSPCPYFIVHIYIYIWQAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFAIFFNQGQCCCAGSRTFVHEKVYDEFVEKARKRAANRVVGDPFLGGIEQGPQVDGEQFKKILRYIQYGIEGGATLEAGGERFGSKGYYVQPTVFSDVKDDMKIAQEEIFGPVQTILKYKDIEEVIRRANASRYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAVPFGGYKMSGHGREKGIYSLSNYLQIKAVVTPLHNPAWL 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 70450 73513 + Hsped.10g00020.1 Hepe10g0002 580549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0002 560 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 330 555 IPR016163 GO:0016620(InterPro)
Hepe10g0002 560 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 267 552 - GO:0004029(PANTHER)
Hepe10g0002 560 FunFam Aldehyde dehydrogenase, mitochondrial 42 249 - -
Hepe10g0002 560 FunFam Mitochondrial aldehyde dehydrogenase 2 332 521 - -
Hepe10g0002 560 FunFam Aldehyde dehydrogenase, putative 522 548 - -
Hepe10g0002 560 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 38 329 IPR016162 GO:0016491(InterPro)
Hepe10g0002 560 SUPERFAMILY ALDH-like 48 555 IPR016161 GO:0016491(InterPro)
Hepe10g0002 560 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 354 365 IPR016160 GO:0016491(InterPro)
Hepe10g0002 560 CDD ALDH_F2BC 50 552 - -
Hepe10g0002 560 MobiDBLite consensus disorder prediction 14 36 - -
Hepe10g0002 560 Pfam Aldehyde dehydrogenase family 262 550 IPR015590 GO:0016491(InterPro)
Hepe10g0002 560 Pfam Aldehyde dehydrogenase family 61 244 IPR015590 GO:0016491(InterPro)
Hepe10g0002 560 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 326 333 IPR029510 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g0002 Hepe-Chr10:70450 Hepe04g1389 Hepe-Chr4:69545447 3.73e-40 dispersed
Hepe03g0048 Hepe-Chr3:596891 Hepe10g0002 Hepe-Chr10:70450 8.08e-62 transposed
Hepe09g0747 Hepe-Chr9:7167395 Hepe10g0002 Hepe-Chr10:70450 2.99e-201 transposed
Hepe10g0002 Hepe-Chr10:70450 Hepe09g0192 Hepe-Chr9:1523972 2.81e-304 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0002 K00128 - csv:101202756 963.755