Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0030 ATGGAAACCCCTTTTCTGGGTTTTCTAGTTTTCGCACTCCTACTCCTCCAACTTGCTTCTGCTACGCTATCTCCTTCTGGTGTCAACTACGAAGTCGTAGCTTTGATGGCCATAAAAAATGATTTAATAGATCCCCACAATGTTTTGGAGAATTGGGATTCTAATTCTGTGGATCCTTGTAGCTGGAGAATGGTCACTTGTTCTCCAGATGGATATGTTTCTGCTTTGGGGCTACCGAGCCAGAGTTTGTCTGGGCTCTTATCACCGGGGATTGGAAACCTCACTAAGTTGGAATCAGTGTTGCTTCAGAACAATGACATCTCGGGGCCAATTCCTGCAACCATTGGAAAGTTAGAGAACCTCCAAACTCTTGATCTCTCCAACAATGTATTTAGAGGCGAAATACCCAGTTCCCTAGGGGACTTAAAGAAGCTGAACTATTTGCGATTAAATAATAACAGCCTAACTGGACCTTGTCCTCAGTCTCTATCCAAAGTTGAAGGTCTCACACTCGTGGACCTTTCATACAACAACTTGAGTGGCACCTTGCCCAAAATATCAGCAAGAACATTCAAAATTGTTGGTAATCCTCTGATCTGTGGTCCAAACAACTGTTCTGCCATCTTTCCGGAGCCGTTGTCATTTACCCCAGATGCTCTTGAAGGAAATTTGGGATTTGGTAAGAGCCACCGCAAGGCAATTGCTTTTGGGGCAAGTTTTAGTGCTGCTTTTATTGTATTAATCCTTATTGGACTACTTGTCTGGTGGAGATACAGACACAACCAGCAGATTTTCTTTGATGTAAATGATCAATATGATCCAGAGGTACGTTTGGGTCATTTGAGAAGGTACACATTCAAGGAACTTCGGGCAGCAACTGATCATTTCAACGCAAAGAATATCTTGGGAAGAGGTGGGTTTGGAATTGTGTTCAAGGGATGCTTAAATGATGGGACTCTGGTAGCGGTTAAAAGGTTGAAGGACTACAACACCGCTGGTGGGGAGATCCAATTTCAGACTGAAGTAGAGATGATAAGCTTAGCAGTACATCGAAATCTTCTCAGGCTTTTTGGCTTTTGTTCTACTGAGAGTGAAAGACTTCTGGTTTACCCTTTCATGCCCAATGGAAGTGTTGCATCTCGTCTAAGAGATCATATCCATGGGCAGCCAGCTCTAGATTGGGCAATGAGAAAGAGAATAGCATTGGGTACAGCTAGAGGATTGGTGTACTTGCACGAGCAGTGTGACCCCAAAATTATCCATCGTGATGTGAAGGCAGCCAACATTCTCCTTGATGAAGATTTTGAGGCCGTCGTTGGAGACTTCGGGTTGGCAAAACTTTTGGATCACAGGGATTCTCATGTGACTACCGCGGTGCGTGGCACTGTTGGCCATATTGCTCCAGAGTACTTATCAACAGGACAATCGTCAGAAAAGACTGATGTTTTTGGGTTTGGAATCTTGCTTTTGGAGTTAGTTACTGGTCAGAAGGCTCTGGATTTTGGTCGAGGAGCAAACCAGAAAGGCGTGATGCTCGACTGGGTGAAAAAGCTGCATCAGGAAGGAAAGCTGAATCTGATGGTGGATAAGGATCTAAGAGGTAAGTTCGACAGAGTCGAGTTAGAGGAAATGGTCCAGGTTGCCCTGTTATGCACTCAATTCAATCCTTCTCACCGACCCAAGATGTCTGAAGTGTTAAAAATGTTGGAAGGCGATGGTTTAGCTGAGAAATGGGAAGCGTCACAGCACATAGAGATGCCAAGATACCGACAATGCGAGAATCCCCCTCAACGGTACTCAGATTATATAGAAGAATCTTCTCTGATAGTAGAAGCCATGGAGCTTTCAGGCCCCAGATGA 1860 44.46 METPFLGFLVFALLLLQLASATLSPSGVNYEVVALMAIKNDLIDPHNVLENWDSNSVDPCSWRMVTCSPDGYVSALGLPSQSLSGLLSPGIGNLTKLESVLLQNNDISGPIPATIGKLENLQTLDLSNNVFRGEIPSSLGDLKKLNYLRLNNNSLTGPCPQSLSKVEGLTLVDLSYNNLSGTLPKISARTFKIVGNPLICGPNNCSAIFPEPLSFTPDALEGNLGFGKSHRKAIAFGASFSAAFIVLILIGLLVWWRYRHNQQIFFDVNDQYDPEVRLGHLRRYTFKELRAATDHFNAKNILGRGGFGIVFKGCLNDGTLVAVKRLKDYNTAGGEIQFQTEVEMISLAVHRNLLRLFGFCSTESERLLVYPFMPNGSVASRLRDHIHGQPALDWAMRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVTGQKALDFGRGANQKGVMLDWVKKLHQEGKLNLMVDKDLRGKFDRVELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAEKWEASQHIEMPRYRQCENPPQRYSDYIEESSLIVEAMELSGPR 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 283159 286987 + Hsped.10g00300.1 Hepe10g0030 580577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0030 619 Pfam Protein tyrosine and serine/threonine kinase 298 569 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0030 619 SUPERFAMILY Protein kinase-like (PK-like) 280 577 IPR011009 -
Hepe10g0030 619 FunFam Somatic embryogenesis receptor-like kinase 1 373 589 - -
Hepe10g0030 619 SUPERFAMILY L domain-like 29 190 - -
Hepe10g0030 619 FunFam Somatic embryogenesis receptor kinase 1 265 372 - -
Hepe10g0030 619 FunFam Putative LRR receptor-like serine/threonine-protein kinase 28 208 - -
Hepe10g0030 619 Gene3D Transferase(Phosphotransferase) domain 1 373 589 - -
Hepe10g0030 619 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524(InterPro)
Hepe10g0030 619 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 619 - -
Hepe10g0030 619 ProSiteProfiles Protein kinase domain profile. 296 586 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0030 619 SMART serkin_6 296 569 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0030 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0030 619 Gene3D Phosphorylase Kinase; domain 1 265 372 - -
Hepe10g0030 619 Gene3D Ribonuclease Inhibitor 28 207 IPR032675 -
Hepe10g0030 619 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515(InterPro)
Hepe10g0030 619 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3235 Hepe-Chr2:81933331 Hepe10g0030 Hepe-Chr10:283159 2.30e-230 dispersed
Hepe04g1924 Hepe-Chr4:74179406 Hepe10g0030 Hepe-Chr10:283159 7.28e-185 dispersed
Hepe07g0324 Hepe-Chr7:3259241 Hepe10g0030 Hepe-Chr10:283159 7.00e-157 dispersed
Hepe07g2279 Hepe-Chr7:67118446 Hepe10g0030 Hepe-Chr10:283159 9.73e-76 dispersed
Hepe08g1197 Hepe-Chr8:12341898 Hepe10g0030 Hepe-Chr10:283159 1.11e-126 dispersed
Hepe09g0139 Hepe-Chr9:1102754 Hepe10g0030 Hepe-Chr10:283159 1.80e-72 dispersed
Hepe09g0542 Hepe-Chr9:5108216 Hepe10g0030 Hepe-Chr10:283159 3.53e-197 dispersed
Hepe10g0030 Hepe-Chr10:283159 Hepe10g1017 Hepe-Chr10:40366415 2.26e-103 dispersed
Hepe10g1844 Hepe-Chr10:55155159 Hepe10g0030 Hepe-Chr10:283159 6.53e-38 dispersed
Hepe10g0030 Hepe-Chr10:283159 Hepe10g1621 Hepe-Chr10:52927749 2.21e-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73155 PF00069 Pkinase 3.20E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0030 - - - 0.0