Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0032 ATGGCGGAGGATATGTACGGTATGCGGTCCTCGCCGGAGAATCTCATCCTTCCCGTGGATTACGAGAGCTTCCGCGATCGGATTCCCATGTTCGGATCCGATGAACTACTTTCCGAACCTGCACCAGGTTTTCCGGTGGTCGGGGAAGATGTTCTCAGCGTCATCAAAGCCAAAATTGTGTCTCATCCTACCTATTCTCGATTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTTGTTGTTGGAGGAAATCCGGCGGAGTGATAAACAAAACCCTATTTCCACGTGCTTCGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAGCTTACTGTGACATGCTGGTGAAGTATAAATCAGATCTGTCAACGCCTTTTCACGAAGCTTCTTCTTTCTTCAATAACATTCAACTGCAACTTACCAACCTCTGTGCGGGTGCTATCTCCTCCGCCAGGAGCCCTTCCAATGAGGATGGTATGTCATCAGATGATGAGATTAATTGGGGAGAGAGGGAACTACAAGATGCTCAAATGAGGTTGGAAGACAAAGGTCTTAAAGATATGCTGTTAAGTAGATTTGGTAGCCACATTGGTAGCTTGAAGCTGGAATTTTCAAAGAAGAAAAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAACTACTGCTCGACTGGTGGAATGTTCACTATAAATGGCCATATCCCACGGAAGCTGATAAGATTGCGCTGGCAGAGACGACAGGACTAGATCCGAAGCAAATTAACAATTGGTTTATTAATCAACGAAAGAGGCACTGGAAACCTTCTGAAAGTATGCAATTTGGAAGTATGCAATTTGGAAGTATGGATAATGTAGGCTTGAGTCTTGAGAACGAGTTGAATGACTTGCTCAGTTTGGGTCAGCATCGTATTTGGAAACGAATGGCCGTCTCCTGGAGCGGTGCAAAACCAGGAGACTGCGTGTTGGATATATGCTGTGGAAGCGGGGATTTGGCTTTCCTCTTATCTCAGAAAGTTGGATCCGATGGAAAGGTGACGGGTCTTGATTTCTCACCGGAGCAGCTAAGTATTGCCTCTTTTCGTCAAAATTCGCTCTCCAACCCCTGCTATAAGAACATTGAGTGGGTGGAAGGTGATGCACTTAATTTGCCATTTTCTGACTGCTCTTTCGATGCCATTACAATGGGCTATGGTCTACGAAATGTGGTGGATAAACGGAAAGCTTTGGAGGAGATGCTTAGAGTACTTAAAAAAGGTAGTAAGGTATCAATTCTCGACTTTAACAAGACTACACAACCGACTGCTGCTGCTATTCAGGAATGGATGATCAACAACATCGTTGTCCCAGTGGCATCTGGTTATGGCCTTGCTGAGGATTATAAATATCTGTCTAAATCCATCAATGATTTTTCAACAGGAAAGGAATTGGAAGAACTTGCCTTAAAAGTAGGGTTTTCTACCTCTGTACATTATGAAATTAGTGGAGGCCTCATGGGAAATTTGGTGGCATCTCGTTAA 1533 44.55 MAEDMYGMRSSPENLILPVDYESFRDRIPMFGSDELLSEPAPGFPVVGEDVLSVIKAKIVSHPTYSRLLQAYIDCQKVGAPPEIALLLEEIRRSDKQNPISTCFGADPELDEFMEAYCDMLVKYKSDLSTPFHEASSFFNNIQLQLTNLCAGAISSARSPSNEDGMSSDDEINWGERELQDAQMRLEDKGLKDMLLSRFGSHIGSLKLEFSKKKKKGKLPKEGRKLLLDWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQFGSMQFGSMDNVGLSLENELNDLLSLGQHRIWKRMAVSWSGAKPGDCVLDICCGSGDLAFLLSQKVGSDGKVTGLDFSPEQLSIASFRQNSLSNPCYKNIEWVEGDALNLPFSDCSFDAITMGYGLRNVVDKRKALEEMLRVLKKGSKVSILDFNKTTQPTAAAIQEWMINNIVVPVASGYGLAEDYKYLSKSINDFSTGKELEELALKVGFSTSVHYEISGGLMGNLVASR 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 293584 305263 + Hsped.10g00320.1 Hepe10g0032 580579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0032 510 Pfam ubiE/COQ5 methyltransferase family 297 503 - -
Hepe10g0032 510 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 283 510 IPR032904 GO:0042372(InterPro)|GO:0052624(InterPro)
Hepe10g0032 510 SMART KNOX1_2 53 97 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Hepe10g0032 510 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 296 498 IPR029063 -
Hepe10g0032 510 SUPERFAMILY Homeodomain-like 211 282 IPR009057 -
Hepe10g0032 510 ProSiteProfiles 'Homeobox' domain profile. 210 273 IPR001356 GO:0003677(InterPro)
Hepe10g0032 510 Pfam ELK domain 191 211 IPR005539 GO:0003677(InterPro)
Hepe10g0032 510 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 72 283 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe10g0032 510 Pfam KNOX2 domain 104 150 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Hepe10g0032 510 SMART KNOX2_2 100 151 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Hepe10g0032 510 Pfam Homeobox KN domain 230 269 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe10g0032 510 CDD homeodomain 224 274 IPR001356 GO:0003677(InterPro)
Hepe10g0032 510 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 277 510 IPR004033 GO:0008168(InterPro)
Hepe10g0032 510 CDD AdoMet_MTases 326 429 - -
Hepe10g0032 510 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 297 508 IPR004033 GO:0008168(InterPro)
Hepe10g0032 510 SMART HOX_1 212 277 IPR001356 GO:0003677(InterPro)
Hepe10g0032 510 Pfam KNOX1 domain 55 93 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Hepe10g0032 510 ProSitePatterns 'Homeobox' domain signature. 248 271 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe10g0032 510 Gene3D - 209 281 - -
Hepe10g0032 510 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 275 510 IPR004033 GO:0008168(InterPro)
Hepe10g0032 510 Gene3D Vaccinia Virus protein VP39 296 510 IPR029063 -
Hepe10g0032 510 SMART ELK_2 190 211 IPR005539 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g0032 Hepe-Chr10:293584 Hepe10g1622 Hepe-Chr10:52932223 1.57e-123 dispersed
Hepe10g0032 Hepe-Chr10:293584 Hepe09g0208 Hepe-Chr9:1730709 3.11e-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56423 PF01209 Ubie_methyltran 1.60E-51 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0032 - - - 0.0