Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0050 ATGAGCCGTGGCCCTTCTTCGAAAGCCTCACTATCACAATATTCGTCCAAAGGGGCATTCTTCATAGCCGTTGGAGTATTTCTCTTTCGAAAACAGCCGGAGAAGAAGATGACTGAAGAACTCTCTGGATTTCGATTCAACGACTCGCCTTGTTGCCTGAAGCGGAAAAGACCTCCCAAGATCGAGATCCCTAAAGTCTTGCGGGAGATTCCGGCCGAAAAACTTGAACACGCCACTCCCCGGATCGATAACGTCTCTTCCGCTAATTTTTTGTTTGCAGATTTTGCAGATCGTGTGGGGGTTTTCTCCGTCAAGGGAAAGAAGAGGTTCATGGAAGATGCTCACAAGATCATTCCTTGCTTGAAAGGCCACTTAAATCATACCTTTTTTGGTGTTTACGATGGCCATGGAGGAAGGAATGCCGCGAGATTTGTTGCAGAAAATTTGCACAATAACATACTTGAAGTGGTGGGCAATTGCACGGGATCTGCAGAGAAGGATGAAGCAATTAAAGCCGCTTTCTTGAAAACGGACCGAGACTTCTTGAATCTGGGTGTAGGCAGTGGTGTCTGCTGTGTCACAGCTCTGATACAAGGAGAAGAAGTTGTTGTTTCCAATTTGGGAGATTGTAGGGCTGTTCTCTCTAGAGGTGGAGTAGCTGAAGCAGTAACAAAAGATCATAGAGTTGAACAGGAGGATGAACGGAAAAGAATAGAAAACAAGGGTGGATATGTTGAGATTCATAGGGGGGCATGGAGAGTTCATGGAATTCTTTCTGTCTCTAGAAGCATTGGAGATGCTCATTTGAAGGATTGGGTGCTGGCAGAGCCTGATTCAAAGGTCCTACTTCTTAGTGAAGACATGGAATTTCTTGTTCTAGCCACTGATGGGCTATGGGAAAAGGTTGGAAATCAAGAGACTGTTGATGTTGTGACACGATTGAGGTCGATGGATAAAAGTTTTGGGCTATCAAAAGGTTCCTTGAGAAGCATTAGCCATGCTCATTGCTATGTGAATCCAAGTCCATCAAAACTACGGAGAGTTTCATTGGTCACGCAACCAAAAGGGGGGGTGGGCCAATCTCCAATATGTGAGAAGGCAGTTGATAGCTGTGAAGAAGGTGGATATGACTATGCTTGTGAAATTGAAAGTCCTGGATCAAAATCAAGAAGAATATCATTGGTCAGACATAAAAAGATGAAGACAGAATCTTCACCTAAGGAGAATAATGATTGCTATAGAAAGAGACCCAGTTCCAATAGACTTGTGGCTGCTTGTAAGGAACTTGTAGAACTAGCTCTGAGTAGGGGTAGTCTGGATGACATTACCGTAATGATAATCGACTTAAGCCACTTTAGGTGCAAGAGCCAATATAAGAATTCTAGTAACTTGTAA 1395 43.73 MSRGPSSKASLSQYSSKGAFFIAVGVFLFRKQPEKKMTEELSGFRFNDSPCCLKRKRPPKIEIPKVLREIPAEKLEHATPRIDNVSSANFLFADFADRVGVFSVKGKKRFMEDAHKIIPCLKGHLNHTFFGVYDGHGGRNAARFVAENLHNNILEVVGNCTGSAEKDEAIKAAFLKTDRDFLNLGVGSGVCCVTALIQGEEVVVSNLGDCRAVLSRGGVAEAVTKDHRVEQEDERKRIENKGGYVEIHRGAWRVHGILSVSRSIGDAHLKDWVLAEPDSKVLLLSEDMEFLVLATDGLWEKVGNQETVDVVTRLRSMDKSFGLSKGSLRSISHAHCYVNPSPSKLRRVSLVTQPKGGVGQSPICEKAVDSCEEGGYDYACEIESPGSKSRRISLVRHKKMKTESSPKENNDCYRKRPSSNRLVAACKELVELALSRGSLDDITVMIIDLSHFRCKSQYKNSSNL 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 463067 467058 + Hsped.10g00500.1 Hepe10g0050 580597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0050 464 CDD PP2Cc 98 313 IPR001932 -
Hepe10g0050 464 SMART PP2C_4 88 447 IPR001932 -
Hepe10g0050 464 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169(InterPro)
Hepe10g0050 464 ProSiteProfiles PPM-type phosphatase domain profile. 98 449 IPR001932 -
Hepe10g0050 464 Gene3D - 86 457 IPR036457 -
Hepe10g0050 464 SUPERFAMILY PP2C-like 97 450 IPR036457 -
Hepe10g0050 464 PANTHER PROTEIN PHOSPHATASE 78 448 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe10g0050 464 Pfam Protein phosphatase 2C 99 317 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1977 Hepe-Chr6:70991704 Hepe10g0050 Hepe-Chr10:463067 6.66e-11 dispersed
Hepe08g2470 Hepe-Chr8:65762522 Hepe10g0050 Hepe-Chr10:463067 5.49e-37 dispersed
Hepe09g1273 Hepe-Chr9:17359646 Hepe10g0050 Hepe-Chr10:463067 1.05e-13 dispersed
Hepe10g0050 Hepe-Chr10:463067 Hepe10g1335 Hepe-Chr10:49448469 4.79e-72 dispersed
Hepe10g0050 Hepe-Chr10:463067 Hepe03g1809 Hepe-Chr3:75003845 3.98e-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0050 - - - 0.0