Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0052 ATGTCAAAACCCTGGGGCGGAATCGGAGCTTGGGCCGCCGATGCCGAGCGTGCCGAGGCTGAGGAACGCGAGGCGGAGGCTGCTGCCGTCGCTTCCCAAACAGAATCCAAGAATTTCCCTAGCCTTAAGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGACGCTCTCTGAATTCACTATGGGTACCGTCACCGGTCTTGGCGCCGGCGGTAGGCACACGGAGAGCCAGGGATTAACTACGGAGGAGATGCTTCGCCTTCCTACTGGTCCTAAAGACCGCTCTGCTGAGGAAATGCGTTCTGGCCGCCTCGGTGGGGGATTTCCCACTTATGATCGACAAGGTATGTCTTCTGGTCGATTTCGAGACCGTGATGAAGCCGGTGATGGCTCTTGGGGTGCTGGTCGACGATCCTATGGTGGCTTTGATGAGGAACGCACTCCTAGGGCTTCTAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACCAAAAAATCTCCCGCATTGGATTCAGGTCGACAGAATAGGTATGGGTCGCTAGGTGGTGGTGGTGGTGGTGGTGGCATGGGTGGGATTTCATCTAGGGCAGACGAGGTCGATAGCTGGGCAAGTGTGAAAAAACCTATTCCCTCGAGATCCTCCACATTTGGTTCTGGTTACCGTGACCGTGAGCCTAATGAGTCTGATCGCTGGACTAGAGGTGGCCGTTCACGTGAGAGTGACACAGAACGACCCCGATTAGTGTTGGATCCACCCAAAGGTAATGTAGTTACAAATGAAGCAACAAGGACGAACAAGGCTAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGAGAAAGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCTAAAAGAAGCAGTAGGCCAACCAGTGCTCACTCTAGTAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTGCAGGGCGTAGAGAATGTGGTGAAGCCAAGGCCAAAAGTCAATCCATTTGGGGATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAAGACTGGAGAAAGATAGATCTGCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAAATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGGTAGCCTTATCTCTGAATACTAACAAAGAATCAGTGCAAGAACCTGCTGGAGAGATACAAAATCTGCGTGACAGAATAAATAAAAAAGAACTCGAACTGGAGACGCTTCTCCTTGATTTGGATGATAAAGTTCGCTTCGGGAAGAAAGCCACCGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCTGTCTTTCCAGAAAGACCGCCATCTCAAGGATCCTTTGATGAGTCCAAAAGTTTTGAGTCTGGAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGATCTACTGAGGATAAAAGACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAAAGGTCGAGGGATAGATGGTAA 1572 50.64 MSKPWGGIGAWAADAERAEAEEREAEAAAVASQTESKNFPSLKEAVNTKPKKKKMTLSEFTMGTVTGLGAGGRHTESQGLTTEEMLRLPTGPKDRSAEEMRSGRLGGGFPTYDRQGMSSGRFRDRDEAGDGSWGAGRRSYGGFDEERTPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGGGGGGMGGISSRADEVDSWASVKKPIPSRSSTFGSGYRDREPNESDRWTRGGRSRESDTERPRLVLDPPKGNVVTNEATRTNKASPFGAARPREEVLAEKGLDWKKLDTEIEAKRSSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEVALSLNTNKESVQEPAGEIQNLRDRINKKELELETLLLDLDDKVRFGKKATERPGSGAGRAAVFPERPPSQGSFDESKSFESGDRPRSRGTADVWSRSTEDKRPIQGARDRGFLGNRDMERSRDRW 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 471943 478160 - Hsped.10g00520.1 Hepe10g0052 580599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0052 523 MobiDBLite consensus disorder prediction 228 254 - -
Hepe10g0052 523 MobiDBLite consensus disorder prediction 309 328 - -
Hepe10g0052 523 Coils Coil 416 436 - -
Hepe10g0052 523 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 441 IPR010433 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)
Hepe10g0052 523 Coils Coil 15 35 - -
Hepe10g0052 523 MobiDBLite consensus disorder prediction 213 227 - -
Hepe10g0052 523 MobiDBLite consensus disorder prediction 475 523 - -
Hepe10g0052 523 MobiDBLite consensus disorder prediction 118 132 - -
Hepe10g0052 523 MobiDBLite consensus disorder prediction 282 308 - -
Hepe10g0052 523 Coils Coil 382 402 - -
Hepe10g0052 523 Pfam Plant specific eukaryotic initiation factor 4B 1 509 IPR010433 GO:0003743(InterPro)
Hepe10g0052 523 MobiDBLite consensus disorder prediction 444 523 - -
Hepe10g0052 523 MobiDBLite consensus disorder prediction 1 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0267 Hepe-Chr8:2452039 Hepe10g0052 Hepe-Chr10:471943 3.83e-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0052 K03258 - csv:101206526 833.943