Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0061 ATGACAATGGCTTCCATATCACCTTCCCGCCCGAACTTTGTTTTCTCTTCGTTTCCGAGCCGTGTTCCGACCTCAAATCCTCTATTTCATGGCGTTCAATTCCGGGGTTTATCCAATCACAAGCCTTTCCTTCGTGGTTCCCTTGCGGTGGCGAGATTTGGGTTCAAACCCGAATTCTTGCCTGACCCAGATAACGCCGAGGGATTTCTTAGAGAATTGTTCGGCAAAGCTGAGAGCGTTCTTTACACGATTGCTGACGCCGCCGTGTCTGCTTCGCCGGAGAATGTTTCCACCGTCAAGCAGACTGACGATTGGTTTACTGGGATTTCCAATTATATGGAGACCGTCCTTAAAATTCTTAAGGATGGACTTTCTACTCTACATGTTCCTTATTCCTATGGTTTTGCCATTATACTTCTTACAATTCTTGTTAAGGCTGCTACCTTTCCTTTGACGAAGAAGCAGGTAGAATCTGCAATGGCGATGCGTTCTTTGCAACCGCAAGTAAAGGCTGTTCAACAACGCTATGCTGGGGATCAGGAGAGGATTCAACTTGAGACTGCTCGACTGTACAAATTAGCTGGCATAAACCCACTGGCAGGATGCCTACCCACGTTGGCGACAATTCCTGTATGGATTGGACTATACAGAGCGCTTTCAAATGTGGCCAACGAGGGTCTCCTCACGGAAGGTTTTTTCTGGATACCCTCTCTGGCTGGTCCAACTGCACTTGCTTCTCGACAAAATGGGAGTGGTATCTCCTGGCTCTTTCCATTTGTTGATGGTCATCCACCACTTGGGTGGTCAGATACCTTGGCGTATCTTGTCTTGCCCGTGTTGCTGGTTGTCTCGCAGTACATCTCTGTTCAAATTATGCAATCGTCGCAGAGTAATGATCCAAACATGAAGAGTTCTCAAGCCATAACGCAGTTCCTACCGTTAATGATTGGATATTTTGCACTTTCAGTTCCTTCTGGTCTAAGTCTTTATTGGCTTACCAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTTGGGTGGTGCAAAACCCCCGGACAAACAGTTCATTGATGAAATCATCAAACAAGAACGAGAACAAACCCGAGTCCAGAGCCAAGTGCCCGAGTTAAATTCAGTCTCGAGTAGCACAGTAGCCCGACAAGAAGAGAAGCCAACAGCAGAAGGGCTAAAACCCGGTGAAAGATTTAAACAGTTAAAGGAGCAAGAGGCTAGGATAAGACAGCAAGAGGAAGAAAAAAGGAAAGCTGAAGAGGCAACCAAGCTTGAATCTCAAACAATAAATGACAGTGACAAGAGCTCAACTATTGGAGTTGTTGTCAATGGCAATCTTTCTAGACAGGATGTAAAGGAAGATCAAAACTCCACATCCACGTCTACTATGCAAAGAACCGATGTGGACACCGAGGTTGACGGTACAAGTGAGCATCTACCAAGTGCAACTCAGGAAGAGGGAGTACTTGAGACATACACCGGGGTGGCCAAGGATGCCAAATTAAACGGAGAAGAACGAAGAGAGTGA 1548 46.19 MTMASISPSRPNFVFSSFPSRVPTSNPLFHGVQFRGLSNHKPFLRGSLAVARFGFKPEFLPDPDNAEGFLRELFGKAESVLYTIADAAVSASPENVSTVKQTDDWFTGISNYMETVLKILKDGLSTLHVPYSYGFAIILLTILVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTALASRQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQSNDPNMKSSQAITQFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKLGGAKPPDKQFIDEIIKQEREQTRVQSQVPELNSVSSSTVARQEEKPTAEGLKPGERFKQLKEQEARIRQQEEEKRKAEEATKLESQTINDSDKSSTIGVVVNGNLSRQDVKEDQNSTSTSTMQRTDVDTEVDGTSEHLPSATQEEGVLETYTGVAKDAKLNGEERRE 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 620373 625720 - Hsped.10g00610.1 Hepe10g0061 580608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0061 515 MobiDBLite consensus disorder prediction 435 476 - -
Hepe10g0061 515 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Hepe10g0061 515 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Hepe10g0061 515 PANTHER OXA1 39 408 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(InterPro)|GO:0032977(PANTHER)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Hepe10g0061 515 MobiDBLite consensus disorder prediction 393 434 - -
Hepe10g0061 515 NCBIfam membrane protein insertase YidC 132 347 IPR028055 -
Hepe10g0061 515 Coils Coil 405 435 - -
Hepe10g0061 515 MobiDBLite consensus disorder prediction 369 493 - -
Hepe10g0061 515 MobiDBLite consensus disorder prediction 369 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g0061 Hepe-Chr10:620373 Hepe10g1213 Hepe-Chr10:47178049 7.86e-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0061 K03217 - csv:101205346 866.3