Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0068 ATGGAAAATGGCTTTTCTTCTCCTCGAAGCGATGCGTTTCCTGTCGGTCTTCGTGTTCTTGTTGTTGATGATGATCCAACATGGCTGAAAATCCTAGAAAAGATGCTGAAAAAGTGCTCTTATGAAGTGACTACATGTTGTTTGGCAAGGGAGGCTCTGAGCCTGCTTAGGGAGAGAAAAGATGGATACGATATCGTAATCAGCGACGTAAACATGCCCGATATGGATGGTTTTAAACTCCTTGAGCATGTAGGATTGGAAATGGACCTGCCAGTTATCATGATGTCAGTCGACGGAGAAACAAGCAGAGTAATGAAAGGGGTTCAACACGGGGCTTGTGATTATCTTTTAAAGCCGATACGAATGAAAGAACTTAGAAATATATGGCAGCACGTATTGCGAAAGAAGATACAAGAGGGAAGAGATATTGATGGCCATGACGTTATTGAAGGCATCCAAATCCTAAGAAATGGGTCAGATAGGTATGATGATAGCCAGTTCCTCAGAGGGGAGGAACTATTTTCAGTGAGGAAAAGAAAAGATGTTGATAAGCTTGAGGACAAAGACTTTGGTGACTCTTCTTCCACAAAGAAAGCCAGAGTTGTTTGGTCAGTTGATCTGCACCAAAAATTTGTAAAAGCAGTACACCATATAGGCTTTGACAAAGTTGGCCCTAAAAAGATCCTTGATCTGATGAATGTCCCATGGCTAACTAGGGAAAATGTAGCTAGCCACTTGCAGAAATATCGCCTCTATTTGAGTCGACTGCAGAAAGAAAATGATCCAAAAGCTTGCTTTGTTGTTGGGATGAAACATACTGATTCGAGTTCGAAGGACGGAGATGGAAACTTCAGCCTTTGTAGCTCATTAGTCGTGCCACAAAATGATGTCACGAATAGCAGCTTTAGTTTTTCAGGTGATAACTTCCTTCAGAATGTAGATTCCTTAGGCTGTGAAGTTGATAGGAAAAAGATTGTTCAAGAGCATACATCAGAGCCAAAAAGAGCTGCTGCTAGGAGTGTTCCTGAACCGATAAAGACACGGTGTACGCAGATGAAATTCAACAACTCTTTTGCCTCTGCTGAATCTGAAGGGAAGTTTGCAGCATTTGATCCAAGCAACCGAACATGTTACCCTTGGGTTGAACCTCCCAAAATAAAGTTCAAACAAGAAAGCAAGCCACTTGTACATTTAGAAGGAGATTTCAGCCAGTTCCCTCAGACGGTTCCGCCACATCAAGTTCAAATCGACCAACTACAATCGATTTCATCCTCTAGTTCGGGACGATCAGCATCAGAGAAAGATATAGCAAGCTCCATTGAAAGTAAACCTCCATATTCAGAAAACTGTAGCCAACAGATGGTCCATTTAAATCTACCAAAAACTACAACTGATTCATTTTCTGGCAAGGCTAAGAGTTTCAATGAGATGAATGATCATTTTGAGCCCATTTCAACTACTACTACTACTACTCCATTGGGCATGAAAAGCCAGAATTTCAACCTTAGCTGCATTTCAACTGATTTAGGAAGTGGGTTACCTTTCGCAACCTTTGATGAAGACTTGCAGGGCTATTTGCTTCAAGATGGTGGTTATCCAAAGAACCTTGAACAACAGATTATAGAGTTTCCAGATTATGGTGATCCAGGTATCTTCACTGAAGTTCCGACTCACCTTTACGATGCAATGAGGTTTGGCTATGAGTATTCCTATGACCCAACCGAGTATCCGGTGATAGATGAAGGGCTATTTATTGCATGA 1761 41.51 MENGFSSPRSDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKKIQEGRDIDGHDVIEGIQILRNGSDRYDDSQFLRGEELFSVRKRKDVDKLEDKDFGDSSSTKKARVVWSVDLHQKFVKAVHHIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDPKACFVVGMKHTDSSSKDGDGNFSLCSSLVVPQNDVTNSSFSFSGDNFLQNVDSLGCEVDRKKIVQEHTSEPKRAAARSVPEPIKTRCTQMKFNNSFASAESEGKFAAFDPSNRTCYPWVEPPKIKFKQESKPLVHLEGDFSQFPQTVPPHQVQIDQLQSISSSSSGRSASEKDIASSIESKPPYSENCSQQMVHLNLPKTTTDSFSGKAKSFNEMNDHFEPISTTTTTTPLGMKSQNFNLSCISTDLGSGLPFATFDEDLQGYLLQDGGYPKNLEQQIIEFPDYGDPGIFTEVPTHLYDAMRFGYEYSYDPTEYPVIDEGLFIA 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 662676 665529 + Hsped.10g00680.1 Hepe10g0068 580615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0068 586 SMART REC_2 17 129 IPR001789 GO:0000160(InterPro)
Hepe10g0068 586 NCBIfam myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677(InterPro)
Hepe10g0068 586 FunFam Two-component response regulator 194 257 - -
Hepe10g0068 586 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160(InterPro)
Hepe10g0068 586 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 343 IPR045279 GO:0009736(InterPro)
Hepe10g0068 586 SUPERFAMILY CheY-like 16 139 IPR011006 -
Hepe10g0068 586 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160(InterPro)
Hepe10g0068 586 FunFam Two-component response regulator 17 172 - -
Hepe10g0068 586 Gene3D - 17 164 - -
Hepe10g0068 586 Gene3D - 194 257 - -
Hepe10g0068 586 MobiDBLite consensus disorder prediction 418 451 - -
Hepe10g0068 586 CDD REC_typeB_ARR-like 19 133 - -
Hepe10g0068 586 Pfam Myb-like DNA-binding domain 200 250 IPR001005 -
Hepe10g0068 586 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0069 Hepe-Chr3:842176 Hepe10g0068 Hepe-Chr10:662676 4.68e-40 dispersed
Hepe08g2484 Hepe-Chr8:66136653 Hepe10g0068 Hepe-Chr10:662676 2.07e-72 dispersed
Hepe09g0595 Hepe-Chr9:5591848 Hepe10g0068 Hepe-Chr10:662676 3.54e-72 dispersed
Hepe10g0068 Hepe-Chr10:662676 Hepe10g1262 Hepe-Chr10:48112377 1.89e-16 dispersed
Hepe10g0068 Hepe-Chr10:662676 Hepe05g1404 Hepe-Chr5:62906870 1.13e-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56425 PF00072 Response_reg 1.20E-24 CL0304 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0068 K14491 - csv:101204370 1012.29